RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 XPOTO43592 962 aaKnown RBP12.56□□□□□ -0.4
LAMA4-201ENST00000230538 SMIM24O75264 130 aa12.56□□□□□ -0.4
LAMA4-201ENST00000230538 CLTAP09496 248 aa12.56□□□□□ -0.4
LAMA4-201ENST00000230538 PTPREP23469 700 aa12.56□□□□□ -0.4
LAMA4-201ENST00000230538 MAP2K2P36507 400 aa12.56□□□□□ -0.4
LAMA4-201ENST00000230538 KCTD16Q68DU8 428 aa12.56□□□□□ -0.4
LAMA4-201ENST00000230538 RAB44Q7Z6P3 723 aaPredicted RBP12.56□□□□□ -0.4
LAMA4-201ENST00000230538 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
LAMA4-201ENST00000230538 STAG1Q8WVM7 1258 aa12.56□□□□□ -0.4
LAMA4-201ENST00000230538 SOS2Q07890 1332 aaPredicted RBP12.56□□□□□ -0.4
LAMA4-201ENST00000230538 PPEF1O14829 653 aaPredicted RBP12.56□□□□□ -0.4
LAMA4-201ENST00000230538 TTC4O95801 387 aa12.56□□□□□ -0.4
LAMA4-201ENST00000230538 SULF1Q8IWU6 871 aa12.56□□□□□ -0.4
LAMA4-201ENST00000230538 DHTKD1Q96HY7 919 aaPredicted RBP12.56□□□□□ -0.4
LAMA4-201ENST00000230538 ACCSQ96QU6 501 aa12.56□□□□□ -0.4
LAMA4-201ENST00000230538 ATP10DQ9P241 1426 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 GPC4O75487 556 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 CIAO1O76071 339 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 PDE8BO95263 885 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 LIG3P49916 1009 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 PROSER3Q2NL68 480 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 FBXO18Q8NFZ0 1043 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 ZNF653Q96CK0 615 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 PPME1Q9Y570 386 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 ABCC12Q96J65 1359 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 SEMA3EO15041 775 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 SLC8A1P32418 973 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 TRAPPC10P48553 1259 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 MIS18BP1Q6P0N0 1132 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 KCTD1Q719H9 257 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 SPICE1Q8N0Z3 855 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 ATP6V0A1Q93050 837 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 AK8Q96MA6 479 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 MAN1B1Q9UKM7 699 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 GOLGA8QA0A0J9YX86 632 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 GOLGA8OA6NCC3 632 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 GOLGA8NF8WBI6 632 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 SUN1O94901 812 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 TTLL1O95922 423 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 GPATCH4Q5T3I0 446 aaKnown RBP12.55□□□□□ -0.4
LAMA4-201ENST00000230538 RASGRP4Q8TDF6 673 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 P2RX5Q93086 422 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 SPDL1Q96EA4 605 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 INTS9Q9NV88 658 aaKnown RBP12.55□□□□□ -0.4
LAMA4-201ENST00000230538 STK17AQ9UEE5 414 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 XDHP47989 1333 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 SNX1Q13596 522 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 USPL1Q5W0Q7 1092 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.55□□□□□ -0.4
LAMA4-201ENST00000230538 MAP4K1Q92918 833 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 ANGPTL3Q9Y5C1 460 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 KDM5CP41229 1560 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 MAGI2Q86UL8 1455 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 ZMYND10O75800 440 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 EEF1GP26641 437 aaKnown RBP12.55□□□□□ -0.4
LAMA4-201ENST00000230538 IL1RL1Q01638 556 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 SLC39A14Q15043 492 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 PGBD1Q96JS3 809 aa12.55□□□□□ -0.4
LAMA4-201ENST00000230538 FTOQ9C0B1 505 aaKnown RBP eCLIP12.55□□□□□ -0.4
LAMA4-201ENST00000230538 DPCR1Q3MIW9 517 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 ZMYM1Q5SVZ6 1142 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 ARHGAP27Q6ZUM4 889 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 FAM186BQ8IYM0 893 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 RNF26Q9BY78 433 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-201ENST00000230538 CDC23Q9UJX2 597 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 KDM5DQ9BY66 1539 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 ERBB4Q15303 1308 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 SNCBQ16143 134 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 BBS5Q8N3I7 341 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 MCUQ8NE86 351 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 NBPF3Q9H094 633 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 IFT122Q9HBG6 1241 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 NUB1Q9Y5A7 615 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 PCDHA5Q9Y5H7 936 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 PLEKHG3A1L390 1219 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 KCTD2Q14681 263 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 TBC1D10BQ4KMP7 808 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-201ENST00000230538 CCDC17Q96LX7 622 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 SNX25Q9H3E2 840 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 RCN2Q14257 317 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 LRRC41Q15345 812 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 ZNF658Q5TYW1 1059 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-201ENST00000230538 RETREG2Q8NC44 543 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 TDRD7Q8NHU6 1098 aaKnown RBP12.54□□□□□ -0.4
LAMA4-201ENST00000230538 PI4K2BQ8TCG2 481 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 CNKSR1Q969H4 720 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-201ENST00000230538 TYW5A2RUC4 315 aaKnown RBP12.54□□□□□ -0.4
LAMA4-201ENST00000230538 CPP00450 1065 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 ACTN1P12814 892 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-201ENST00000230538 NLRP7Q8WX94 980 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 SLC38A10Q9HBR0 1119 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 SPECC1L-ADORA2AF8WAN1 911 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 IFNAR2P48551 515 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 DPP9Q86TI2 863 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 METTL23Q86XA0 190 aa12.54□□□□□ -0.4
LAMA4-201ENST00000230538 NSUN7Q8NE18 718 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms