RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 REXO2Q9Y3B8 237 aaKnown RBP22.93■■□□□ 1.26
SNX3-201ENST00000230085 TMEM88BA6NKF7 163 aa22.92■■□□□ 1.26
SNX3-201ENST00000230085 PHF20L1A8MW92 1017 aa22.92■■□□□ 1.26
SNX3-201ENST00000230085 SHOX2O60902 331 aaPredicted RBP22.92■■□□□ 1.26
SNX3-201ENST00000230085 EEF1GP26641 437 aaKnown RBP22.92■■□□□ 1.26
SNX3-201ENST00000230085 C1QTNF8P60827 252 aa22.92■■□□□ 1.26
SNX3-201ENST00000230085 NOA1Q8NC60 698 aaKnown RBP22.92■■□□□ 1.26
SNX3-201ENST00000230085 OR8K1Q8NGG5 319 aa22.92■■□□□ 1.26
SNX3-201ENST00000230085 ESR2Q92731 530 aa22.92■■□□□ 1.26
SNX3-201ENST00000230085 UBAC1Q9BSL1 405 aa22.92■■□□□ 1.26
SNX3-201ENST00000230085 ZNF341Q9BYN7 854 aa22.92■■□□□ 1.26
SNX3-201ENST00000230085 LCMT1Q9UIC8 334 aa22.92■■□□□ 1.26
SNX3-201ENST00000230085 DDAH1O94760 285 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 CPP00450 1065 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 AFMP43652 599 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 APLP1P51693 650 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 KLHL10Q6JEL2 608 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 ARMC9Q7Z3E5 817 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 ZNF572Q7Z3I7 529 aaPredicted RBP22.91■■□□□ 1.26
SNX3-201ENST00000230085 CPLX3Q8WVH0 158 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 WRNIP1Q96S55 665 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 CTNND2Q9UQB3 1225 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 LRRIQ3A6PVS8 624 aaPredicted RBP22.91■■□□□ 1.26
SNX3-201ENST00000230085 KCNJ18B7U540 433 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 PPFIA4O75335 1185 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 KRT9P35527 623 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 STX17P56962 302 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 FKBP1BP68106 108 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 CDK17Q00537 523 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 KCNJ12Q14500 433 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 RRP1BQ14684 758 aaKnown RBP22.91■■□□□ 1.26
SNX3-201ENST00000230085 KCNB1Q14721 858 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 TTC38Q5R3I4 469 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 C16orf86Q6ZW13 317 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 RETREG2Q8NC44 543 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 ZNF507Q8TCN5 953 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 NOC3LQ8WTT2 800 aaKnown RBP22.91■■□□□ 1.26
SNX3-201ENST00000230085 ZKSCAN4Q969J2 545 aaPredicted RBP22.91■■□□□ 1.26
SNX3-201ENST00000230085 CAPN11Q9UMQ6 739 aa22.91■■□□□ 1.26
SNX3-201ENST00000230085 LAMB1P07942 1786 aa22.9■■□□□ 1.26
SNX3-201ENST00000230085 LGALS16A8MUM7 142 aa22.9■■□□□ 1.26
SNX3-201ENST00000230085 N4BP1O75113 896 aaKnown RBP22.9■■□□□ 1.26
SNX3-201ENST00000230085 INPP5BP32019 993 aa22.9■■□□□ 1.26
SNX3-201ENST00000230085 IREB2P48200 963 aaKnown RBP22.9■■□□□ 1.26
SNX3-201ENST00000230085 CDK8P49336 464 aa22.9■■□□□ 1.26
SNX3-201ENST00000230085 CORO7P57737 925 aa22.9■■□□□ 1.26
SNX3-201ENST00000230085 SAPCD2Q86UD0 394 aa22.9■■□□□ 1.26
SNX3-201ENST00000230085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.9■■□□□ 1.269e-8■■□□□ 12.7
SNX3-201ENST00000230085 IQCDQ96DY2 449 aa22.9■■□□□ 1.26
SNX3-201ENST00000230085 PURBQ96QR8 312 aaKnown RBP22.9■■□□□ 1.26
SNX3-201ENST00000230085 FAM107BQ9H098 131 aa22.9■■□□□ 1.26
SNX3-201ENST00000230085 ZNF112Q9UJU3 913 aa22.9■■□□□ 1.26
SNX3-201ENST00000230085 PAPPA2Q9BXP8 1791 aa22.9■■□□□ 1.26
SNX3-201ENST00000230085 TNKSO95271 1327 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 RHOXF2BP0C7M4 288 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 SHMT1P34896 483 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 NOP2P46087 812 aaKnown RBP22.89■■□□□ 1.26
SNX3-201ENST00000230085 NT5C2P49902 561 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 KRT83P78385 493 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 TATDN1Q6P1N9 297 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 LRRC31Q6UY01 552 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 COG1Q8WTW3 980 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 NUP88Q99567 741 aaPredicted RBP22.89■■□□□ 1.26
SNX3-201ENST00000230085 RHOXF2Q9BQY4 288 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 THAP9Q9H5L6 903 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 HPCAL4Q9UM19 191 aa22.89■■□□□ 1.26
SNX3-201ENST00000230085 ROBO3Q96MS0 1386 aa22.89■■□□□ 1.25
SNX3-201ENST00000230085 SYF2O95926 243 aaKnown RBP22.89■■□□□ 1.25
SNX3-201ENST00000230085 LONP1P36776 959 aaKnown RBP22.89■■□□□ 1.25
SNX3-201ENST00000230085 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.89■■□□□ 1.25
SNX3-201ENST00000230085 CCDC170Q8IYT3 715 aa22.89■■□□□ 1.25
SNX3-201ENST00000230085 ABT1Q9ULW3 272 aaKnown RBP22.89■■□□□ 1.25
SNX3-201ENST00000230085 SAR1BQ9Y6B6 198 aa22.89■■□□□ 1.25
SNX3-201ENST00000230085 RNF225M0QZC1 329 aaPredicted RBP22.88■■□□□ 1.25
SNX3-201ENST00000230085 PRDM1O75626 825 aa22.88■■□□□ 1.25
SNX3-201ENST00000230085 CLSTN1O94985 981 aa22.88■■□□□ 1.25
SNX3-201ENST00000230085 HUNKP57058 714 aa22.88■■□□□ 1.25
SNX3-201ENST00000230085 EARS2Q5JPH6 523 aaKnown RBP22.88■■□□□ 1.25
SNX3-201ENST00000230085 LDLRAD1Q5T700 205 aa22.88■■□□□ 1.25
SNX3-201ENST00000230085 RRAGBQ5VZM2 374 aa22.88■■□□□ 1.25
SNX3-201ENST00000230085 NELFBQ8WX92 580 aa22.88■■□□□ 1.25
SNX3-201ENST00000230085 CLMNQ96JQ2 1002 aa22.88■■□□□ 1.25
SNX3-201ENST00000230085 NUP58Q9BVL2 599 aa22.88■■□□□ 1.25
SNX3-201ENST00000230085 SUGCTQ9HAC7 445 aa22.88■■□□□ 1.25
SNX3-201ENST00000230085 SWAP70Q9UH65 585 aa22.88■■□□□ 1.25
SNX3-201ENST00000230085 HTRA3P83110 453 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 TROAPQ12815 778 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 SHROOM1Q2M3G4 852 aaPredicted RBP22.87■■□□□ 1.25
SNX3-201ENST00000230085 FIGNQ5HY92 759 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 IRF2BP1Q8IU81 584 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 ANKRD13AQ8IZ07 590 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 ADSSL1Q8N142 457 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 MB21D1Q8N884 522 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 AFAP1L1Q8TED9 768 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 MTRQ99707 1265 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 SLF1Q9BQI6 1058 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 FAM204AQ9H8W3 233 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 RSPH14Q9UHP6 348 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 TLL2Q9Y6L7 1015 aa22.87■■□□□ 1.25
SNX3-201ENST00000230085 FAM205CA6NFA0 338 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms