RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CERKQ8TCT0 537 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 SNX29Q8TEQ0 813 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 IFIH1Q9BYX4 1025 aaKnown RBP18.08■□□□□ 0.48
LTBR-201ENST00000228918 CAPN6Q9Y6Q1 641 aa18.08■□□□□ 0.48
LTBR-201ENST00000228918 USO1O60763 962 aaKnown RBP18.07■□□□□ 0.48
LTBR-201ENST00000228918 HOXA7P31268 230 aaPredicted RBP18.07■□□□□ 0.48
LTBR-201ENST00000228918 LRRC47Q8N1G4 583 aaKnown RBP18.07■□□□□ 0.48
LTBR-201ENST00000228918 NUDT12Q9BQG2 462 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 JADE2Q9NQC1 790 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 PCDHA13Q9Y5I0 950 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 THSD7AQ9UPZ6 1657 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 RAD51AP2Q09MP3 1159 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 IQCEQ6IPM2 695 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 KCNK18Q7Z418 384 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 CCDC84Q86UT8 332 aaPredicted RBP18.07■□□□□ 0.48
LTBR-201ENST00000228918 SMCR8Q8TEV9 937 aaPredicted RBP18.07■□□□□ 0.48
LTBR-201ENST00000228918 TBC1D22AQ8WUA7 517 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 SNX12Q9UMY4 172 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 JRKLQ9Y4A0 524 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 MYH10P35580 1976 aa18.07■□□□□ 0.48
LTBR-201ENST00000228918 IGKV6D-41A0A0C4DH26 115 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 TACC1O75410 805 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 ACTN2P35609 894 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 EIF4A3P38919 411 aaKnown RBP18.06■□□□□ 0.48
LTBR-201ENST00000228918 GABPAQ06546 454 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 KRT79Q5XKE5 535 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 PPP1R18Q6NYC8 613 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 FOXR2Q6PJQ5 311 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 DDX12PQ92771 950 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 C8orf37Q96NL8 207 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 MMRN2Q9H8L6 949 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 HPCAL4Q9UM19 191 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 MYH7BA7E2Y1 1941 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 ZC3H4Q9UPT8 1303 aaKnown RBP18.06■□□□□ 0.48
LTBR-201ENST00000228918 LRRC53A6NM62 1247 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 TNNT3P45378 269 aaPredicted RBP18.06■□□□□ 0.48
LTBR-201ENST00000228918 TNNI2P48788 182 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 C2orf54Q08AI8 447 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 PSMD2Q13200 908 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 FAM196AQ6ZSG2 479 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 BAP1Q92560 729 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 LRRC27Q9C0I9 530 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 MLXIPQ9HAP2 919 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 DAGLAQ9Y4D2 1042 aa18.06■□□□□ 0.48
LTBR-201ENST00000228918 AKR1B1P15121 316 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 FAM182BQ5T319 152 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 ZNF572Q7Z3I7 529 aaPredicted RBP18.05■□□□□ 0.48
LTBR-201ENST00000228918 CREG2Q8IUH2 290 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 GLIS3Q8NEA6 775 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 COG1Q8WTW3 980 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 DEF6Q9H4E7 631 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 RIC8AQ9NPQ8 531 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 LTBP1Q14766 1721 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 C10orf71Q711Q0 1435 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 PHACTR2O75167 634 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 SYF2O95926 243 aaKnown RBP18.05■□□□□ 0.48
LTBR-201ENST00000228918 PPP4R3AQ6IN85 833 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 CLEC10AQ8IUN9 316 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 NGLY1Q96IV0 654 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 TSG101Q99816 390 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 TRIM34Q9BYJ4 488 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
LTBR-201ENST00000228918 ZMYND10O75800 440 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 MOCS3O95396 460 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 MYBL2P10244 700 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 PRLRP16471 622 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 CLK2P49760 499 aaKnown RBP18.04■□□□□ 0.48
LTBR-201ENST00000228918 ITIH3Q06033 890 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 PDXDC1Q6P996 788 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 RRAGAQ7L523 313 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 TBC1D16Q8TBP0 767 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 JMJD4Q9H9V9 463 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 GPCPD1Q9NPB8 672 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 POLLQ9UGP5 575 aa18.04■□□□□ 0.48
LTBR-201ENST00000228918 PNMA6FA0A0J9YX94 578 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 PJA2O43164 708 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 AKR1B10O60218 316 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 PPP1R11O60927 126 aaPredicted RBP18.03■□□□□ 0.48
LTBR-201ENST00000228918 RNF40O75150 1001 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 EIF6P56537 245 aaKnown RBP18.03■□□□□ 0.48
LTBR-201ENST00000228918 LRRC41Q15345 812 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 ECM1Q16610 540 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 UBE2SQ16763 222 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 ZCWPW2Q504Y3 356 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 DPP8Q6V1X1 898 aaPredicted RBP18.03■□□□□ 0.48
LTBR-201ENST00000228918 CCNI2Q6ZMN8 369 aaPredicted RBP18.03■□□□□ 0.48
LTBR-201ENST00000228918 PROM2Q8N271 834 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 MMGT1Q8N4V1 131 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 DNAJC19Q96DA6 116 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 RBM17Q96I25 401 aaKnown RBP18.03■□□□□ 0.48
LTBR-201ENST00000228918 EDEM3Q9BZQ6 932 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 CWC15Q9P013 229 aaKnown RBP18.03■□□□□ 0.48
LTBR-201ENST00000228918 LRRC37AA6NMS7 1700 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 PRPF6O94906 941 aaKnown RBP18.03■□□□□ 0.48
LTBR-201ENST00000228918 ZNF543Q08ER8 600 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 COASYQ13057 564 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 PICALMQ13492 652 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 LEKR1Q6ZMV7 388 aa18.03■□□□□ 0.48
LTBR-201ENST00000228918 GSPT2Q8IYD1 628 aaKnown RBP18.03■□□□□ 0.48
LTBR-201ENST00000228918 MYOCDQ8IZQ8 938 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms