RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 NLRP14Q86W24 1093 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 WHAMMQ8TF30 809 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 VCPKMTQ9H867 229 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 MMRN2Q9H8L6 949 aa15.47■□□□□ 0.07
SCNN1A-201ENST00000228916 ESYT3A0FGR9 886 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 GRID2IPA4D2P6 1211 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 SLC1A4P43007 532 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 RASSF7Q02833 373 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 GFPT1Q06210 699 aaPredicted RBP15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 ACTN3Q08043 901 aaPredicted RBP15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 ITGB3BPQ13352 177 aaPredicted RBP15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 HGSNATQ68CP4 663 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 GALNT17Q6IS24 598 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 PDXDC1Q6P996 788 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 EDEM3Q9BZQ6 932 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 POLD4Q9HCU8 107 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 TCP11L1Q9NUJ3 509 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 FAM107AO95990 144 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 ATP6V1AP38606 617 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 C6orf89Q6UWU4 347 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 CASKIN2Q8WXE0 1202 aa15.46■□□□□ 0.07
SCNN1A-201ENST00000228916 LAMB1P07942 1786 aa15.46■□□□□ 0.06
SCNN1A-201ENST00000228916 BUB1O43683 1085 aa15.46■□□□□ 0.06
SCNN1A-201ENST00000228916 CAMTA2O94983 1202 aa15.46■□□□□ 0.06
SCNN1A-201ENST00000228916 SMTNP53814 917 aa15.46■□□□□ 0.06
SCNN1A-201ENST00000228916 IFT81Q8WYA0 676 aa15.46■□□□□ 0.06
SCNN1A-201ENST00000228916 NIP7Q9Y221 180 aaKnown RBP eCLIP15.46■□□□□ 0.06
SCNN1A-201ENST00000228916 SEC24CP53992 1094 aa15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 HDLBPQ00341 1268 aaKnown RBP15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 AMPD3Q01432 767 aa15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 PPP4R3AQ6IN85 833 aa15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 TMED8Q6PL24 325 aaPredicted RBP15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 ARHGAP27Q6ZUM4 889 aa15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 HPS3Q969F9 1004 aa15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 INPP4AQ96PE3 977 aaPredicted RBP15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 RASSF9O75901 435 aa15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 HSPA9P38646 679 aaKnown RBP15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 MMP14P50281 582 aa15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 DRP2Q13474 957 aa15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 CDC37Q16543 378 aaPredicted RBP15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 TACO1Q9BSH4 297 aaKnown RBP15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 DCP1AQ9NPI6 582 aaPredicted RBP15.45■□□□□ 0.06
SCNN1A-201ENST00000228916 CHUKO15111 745 aa15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 OR52Z1P0C646 297 aa15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 MYBP10242 640 aa15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 GUCY2FP51841 1108 aa15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 STAG2Q8N3U4 1231 aa15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 CRKLP46109 303 aaKnown RBP15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 C3orf67Q6ZVT6 689 aa15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 EIF1ADQ8N9N8 165 aaKnown RBP15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 JPH2Q9BR39 696 aaPredicted RBP15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 TMBIM4Q9HC24 238 aa15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 SLC39A2Q9NP94 309 aa15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 CASZ1Q86V15 1759 aa15.44■□□□□ 0.06
SCNN1A-201ENST00000228916 TSPY2A6NKD2 308 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 FGFR1OPO95684 399 aaKnown RBP15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 CYP2D6P10635 497 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 HSPA2P54652 639 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 SLC35G1Q2M3R5 365 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 CCDC13Q8IYE1 715 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 KRT12Q99456 494 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 MMTAG2Q9BU76 263 aaKnown RBP15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 STXBP3O00186 592 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 PALMO75781 387 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 NAB2Q15742 525 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 PARP10Q53GL7 1025 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 LRIG3Q6UXM1 1119 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 LRRC55Q6ZSA7 311 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 ZKSCAN4Q969J2 545 aaPredicted RBP15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 PLCB1Q9NQ66 1216 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 CCDC87Q9NVE4 849 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 BARHL2Q9NY43 387 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 PCDHGC5Q9Y5F6 944 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 LAMB2P55268 1798 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 CCDC172P0C7W6 258 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 CHRM1P11229 460 aaPredicted RBP15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 GRM4Q14833 912 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 SLC4A8Q2Y0W8 1093 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 CCDC40Q4G0X9 1142 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 SBK1Q52WX2 424 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 MEI1Q5TIA1 1274 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 GPIHBP1Q8IV16 184 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 GUF1Q8N442 669 aaKnown RBP15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 C3orf20Q8ND61 904 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 SYN2Q92777 582 aaPredicted RBP15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 NSUN4Q96CB9 384 aaKnown RBP15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 FAM84BQ96KN1 310 aaPredicted RBP15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 KLC4Q9NSK0 619 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 PLAAQ9Y263 795 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 KIAA1551Q9HCM1 1747 aa15.43■□□□□ 0.06
SCNN1A-201ENST00000228916 SCN7AQ01118 1682 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 GNAQP50148 359 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 LRRC63Q05C16 580 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 IFT88Q13099 833 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 TRADDQ15628 312 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 RNF187Q5TA31 235 aaPredicted RBP15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 TMC4Q7Z404 712 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 DGKHQ86XP1 1220 aa15.42■□□□□ 0.06
SCNN1A-201ENST00000228916 TEX2Q8IWB9 1127 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms