RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 GH1P01241 217 aa20.83■□□□□ 0.93
PFN1-201ENST00000225655 CCL23P55773 120 aa20.83■□□□□ 0.93
PFN1-201ENST00000225655 FGD1P98174 961 aa20.83■□□□□ 0.93
PFN1-201ENST00000225655 PTPN11Q06124 597 aaPredicted RBP20.83■□□□□ 0.93
PFN1-201ENST00000225655 SLC35G1Q2M3R5 365 aa20.83■□□□□ 0.93
PFN1-201ENST00000225655 BLOC1S2Q6QNY1 142 aa20.83■□□□□ 0.93
PFN1-201ENST00000225655 MB21D2Q8IYB1 491 aaPredicted RBP20.83■□□□□ 0.93
PFN1-201ENST00000225655 TMEM87BQ96K49 555 aa20.83■□□□□ 0.93
PFN1-201ENST00000225655 MTIF3Q9H2K0 278 aaKnown RBP20.83■□□□□ 0.93
PFN1-201ENST00000225655 BAZ2BQ9UIF8 2168 aaKnown RBP20.82■□□□□ 0.92
PFN1-201ENST00000225655 PRC1O43663 620 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 FGBP02675 491 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 NR3C2P08235 984 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 ANTXR2P58335 489 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 ARHGAP1Q07960 439 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 LY6KQ17RY6 165 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 TMEM67Q5HYA8 995 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 DHX32Q7L7V1 743 aaKnown RBP20.82■□□□□ 0.92
PFN1-201ENST00000225655 CHST3Q7LGC8 479 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 CATIPQ7Z7H3 387 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 RPUSD2Q8IZ73 545 aaKnown RBP20.82■□□□□ 0.92
PFN1-201ENST00000225655 IGDCC4Q8TDY8 1250 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 AFG1LQ8WV93 481 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 TIFAQ96CG3 184 aa20.82■□□□□ 0.92
PFN1-201ENST00000225655 CYTH3O43739 400 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 MMP3P08254 477 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 CYP2C9P11712 490 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 FAM47CQ5HY64 1035 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 HOMER1Q86YM7 354 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 TMTC2Q8N394 836 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 MYLIPQ8WY64 445 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 EMID1Q96A84 441 aaPredicted RBP20.81■□□□□ 0.92
PFN1-201ENST00000225655 PIGSQ96S52 555 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 PDCD2LQ9BRP1 358 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 BACH2Q9BYV9 841 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 C22orf23Q9BZE7 217 aa20.81■□□□□ 0.92
PFN1-201ENST00000225655 DDX41Q9UJV9 622 aaKnown RBP20.81■□□□□ 0.92
PFN1-201ENST00000225655 PNMA6FA0A0J9YX94 578 aa20.8■□□□□ 0.92
PFN1-201ENST00000225655 GRXCR1A8MXD5 290 aa20.8■□□□□ 0.92
PFN1-201ENST00000225655 DLL1O00548 723 aa20.8■□□□□ 0.92
PFN1-201ENST00000225655 CASTP20810 708 aaKnown RBP20.8■□□□□ 0.92
PFN1-201ENST00000225655 MAP3K14Q99558 947 aa20.8■□□□□ 0.92
PFN1-201ENST00000225655 PBX4Q9BYU1 374 aa20.8■□□□□ 0.92
PFN1-201ENST00000225655 TM6SF1Q9BZW5 370 aa20.8■□□□□ 0.92
PFN1-201ENST00000225655 ZNF576Q9H609 170 aa20.8■□□□□ 0.92
PFN1-201ENST00000225655 CXXC1Q9P0U4 656 aaPredicted RBP20.8■□□□□ 0.92
PFN1-201ENST00000225655 CYP46A1Q9Y6A2 500 aa20.8■□□□□ 0.92
PFN1-201ENST00000225655 PFKMP08237 780 aa20.79■□□□□ 0.92
PFN1-201ENST00000225655 FOSL2P15408 326 aa20.79■□□□□ 0.92
PFN1-201ENST00000225655 HOXA13P31271 388 aaPredicted RBP20.79■□□□□ 0.92
PFN1-201ENST00000225655 ADCK5Q3MIX3 580 aa20.79■□□□□ 0.92
PFN1-201ENST00000225655 NFXL1Q6ZNB6 911 aa20.79■□□□□ 0.92
PFN1-201ENST00000225655 OTOP2Q7RTS6 562 aa20.79■□□□□ 0.92
PFN1-201ENST00000225655 MAFAQ8NHW3 353 aaPredicted RBP20.79■□□□□ 0.92
PFN1-201ENST00000225655 VWCEQ96DN2 955 aa20.79■□□□□ 0.92
PFN1-201ENST00000225655 SCLYQ96I15 445 aa20.79■□□□□ 0.92
PFN1-201ENST00000225655 MRVI1Q9Y6F6 885 aa20.79■□□□□ 0.92
PFN1-201ENST00000225655 TANC1Q9C0D5 1861 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 GCOM1H8Y6P7 765 aaPredicted RBP20.78■□□□□ 0.92
PFN1-201ENST00000225655 PITPNM1O00562 1244 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 RGS20O76081 388 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 POLR2MP0CAP2 368 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 PBX2P40425 430 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 GRIN2CQ14957 1233 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 PGM5Q15124 567 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 KCNV1Q6PIU1 500 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 VSIG10LQ86VR7 867 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 SESTD1Q86VW0 696 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.78■□□□□ 0.92
PFN1-201ENST00000225655 LY9Q9HBG7 655 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 MYH7BA7E2Y1 1941 aa20.78■□□□□ 0.92
PFN1-201ENST00000225655 GBF1Q92538 1859 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 SCN5AQ14524 2016 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 CDH23Q9H251 3354 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 CCDC69A6NI79 296 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 MYCLP12524 364 aaPredicted RBP20.77■□□□□ 0.92
PFN1-201ENST00000225655 RPS6KB1P23443 525 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 RFC2P35250 354 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 LAMC2Q13753 1193 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 RAB30Q15771 203 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 DGKDQ16760 1214 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 SYNE3Q6ZMZ3 975 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 PPTC7Q8NI37 304 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 PPP1R13LQ8WUF5 828 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 KAT2BQ92831 832 aa20.77■□□□□ 0.92
PFN1-201ENST00000225655 DDAH1O94760 285 aa20.76■□□□□ 0.91
PFN1-201ENST00000225655 PTGISQ16647 500 aa20.76■□□□□ 0.91
PFN1-201ENST00000225655 RUFY3Q7L099 469 aa20.76■□□□□ 0.91
PFN1-201ENST00000225655 ZNF654Q8IZM8 581 aa20.76■□□□□ 0.91
PFN1-201ENST00000225655 IL31RAQ8NI17 732 aa20.76■□□□□ 0.91
PFN1-201ENST00000225655 CTCFLQ8NI51 663 aaPredicted RBP20.76■□□□□ 0.91
PFN1-201ENST00000225655 SPZ1Q9BXG8 430 aa20.76■□□□□ 0.91
PFN1-201ENST00000225655 ZSWIM6Q9HCJ5 1215 aa20.76■□□□□ 0.91
PFN1-201ENST00000225655 MSRAQ9UJ68 235 aa20.76■□□□□ 0.91
PFN1-201ENST00000225655 NOD1Q9Y239 953 aa20.76■□□□□ 0.91
PFN1-201ENST00000225655 SH2B2O14492 632 aaPredicted RBP20.75■□□□□ 0.91
PFN1-201ENST00000225655 IQCF3P0C7M6 154 aa20.75■□□□□ 0.91
PFN1-201ENST00000225655 SMARCA1P28370 1054 aa20.75■□□□□ 0.91
PFN1-201ENST00000225655 CCND2P30279 289 aa20.75■□□□□ 0.91
PFN1-201ENST00000225655 KIF5BP33176 963 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms