RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 SF3B2Q13435 895 aaKnown RBP14.99□□□□□ -0.01
RAB3D-201ENST00000222120 AFAP1L1Q8TED9 768 aa14.99□□□□□ -0.01
RAB3D-201ENST00000222120 HDAC9Q9UKV0 1011 aa14.99□□□□□ -0.01
RAB3D-201ENST00000222120 CHD2O14647 1828 aaKnown RBP14.99□□□□□ -0.01
RAB3D-201ENST00000222120 AFDNP55196 1824 aaKnown RBP14.99□□□□□ -0.01
RAB3D-201ENST00000222120 ATP1A1P05023 1023 aaKnown RBP14.99□□□□□ -0.01
RAB3D-201ENST00000222120 SLURP2P0DP57 97 aa14.99□□□□□ -0.01
RAB3D-201ENST00000222120 HPDP32754 393 aaPredicted RBP14.99□□□□□ -0.01
RAB3D-201ENST00000222120 PMS1P54277 932 aaKnown RBP14.99□□□□□ -0.01
RAB3D-201ENST00000222120 IFI16Q16666 785 aaKnown RBP14.99□□□□□ -0.01
RAB3D-201ENST00000222120 TRIM65Q6PJ69 517 aa14.99□□□□□ -0.01
RAB3D-201ENST00000222120 LARGE2Q8N3Y3 721 aa14.99□□□□□ -0.01
RAB3D-201ENST00000222120 FAM76AQ8TAV0 307 aa14.99□□□□□ -0.01
RAB3D-201ENST00000222120 BICD1Q96G01 975 aa14.99□□□□□ -0.01
RAB3D-201ENST00000222120 AMNQ9BXJ7 453 aa14.99□□□□□ -0.01
RAB3D-201ENST00000222120 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.99□□□□□ -0.01
RAB3D-201ENST00000222120 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.99□□□□□ -0.01
RAB3D-201ENST00000222120 TLDC2A0PJX2 215 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 KCNK3O14649 394 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 EXOC3O60645 756 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 ATP2C2O75185 946 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 PRPF6O94906 941 aaKnown RBP14.98□□□□□ -0.01
RAB3D-201ENST00000222120 MYCLP12524 364 aaPredicted RBP14.98□□□□□ -0.01
RAB3D-201ENST00000222120 CDC37Q16543 378 aaPredicted RBP14.98□□□□□ -0.01
RAB3D-201ENST00000222120 TDRD3Q9H7E2 651 aaKnown RBP14.98□□□□□ -0.01
RAB3D-201ENST00000222120 MAGEF1Q9HAY2 307 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 EMILIN3Q9NT22 766 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 STK17AQ9UEE5 414 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 ARHGEF35A5YM69 484 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 GOLGA6CA6NDK9 693 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 ZNF185O15231 689 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 GAS7O60861 476 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 GOLGA6DP0CG33 693 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 ERVK-24P63145 666 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 CCSER1Q9C0I3 900 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 GOLGA6AQ9NYA3 693 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 FRMD4BQ9Y2L6 1034 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 NPHP3-ACAD11A0A0J9YXS1 232 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 LRRC53A6NM62 1247 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 CASP8Q14790 479 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 WDR78Q5VTH9 848 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 PIGOQ8TEQ8 1089 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 U2AF1L4Q8WU68 220 aaKnown RBP14.98□□□□□ -0.01
RAB3D-201ENST00000222120 ARHGEF10LQ9HCE6 1279 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 MTMR4Q9NYA4 1195 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 COL4A3BPQ9Y5P4 624 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 KDM3AQ9Y4C1 1321 aa14.98□□□□□ -0.01
RAB3D-201ENST00000222120 POTEFA5A3E0 1075 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 MYL1P05976 194 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 POTEIP0CG38 1075 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 CFAP221Q4G0U5 840 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 NAA35Q5VZE5 725 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 RCSD1Q6JBY9 416 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 POTEGQ6S5H5 508 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 POTEEQ6S8J3 1075 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 MIGA2Q7L4E1 593 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 RASSF4Q9H2L5 321 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 BHMT2Q9H2M3 363 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 PCDHA13Q9Y5I0 950 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 LRRC37A3O60309 1634 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 MYMKA6NI61 221 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 CYTH3O43739 400 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 SORBS3O60504 671 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 VSNL1P62760 191 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 LLGL1Q15334 1064 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 UNC13DQ70J99 1090 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 CCDC155Q8N6L0 562 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 NAP1L4Q99733 375 aaKnown RBP14.97□□□□□ -0.01
RAB3D-201ENST00000222120 ANO3Q9BYT9 981 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 RGPD5Q99666 1765 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 NCK2O43639 380 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 CALUO43852 315 aaPredicted RBP14.97□□□□□ -0.01
RAB3D-201ENST00000222120 RAD17O75943 681 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 GH2P01242 217 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 EEF2P13639 858 aaKnown RBP14.97□□□□□ -0.01
RAB3D-201ENST00000222120 PDXDC2PQ6P474 469 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 NSMFQ6X4W1 530 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 NLGN1Q8N2Q7 840 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 MYO1AQ9UBC5 1043 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 HYOU1Q9Y4L1 999 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 KDM4FA0A1W2PPD8 638 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 PDHBP11177 359 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 PDE6BP35913 854 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 GJC1P36383 396 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 GFPT1Q06210 699 aaPredicted RBP14.97□□□□□ -0.01
RAB3D-201ENST00000222120 RPS6KA1Q15418 735 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 QRICH1Q2TAL8 776 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 TMC4Q7Z404 712 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 NOA1Q8NC60 698 aaKnown RBP14.97□□□□□ -0.01
RAB3D-201ENST00000222120 COA1Q9GZY4 146 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 GLT8D2Q9H1C3 349 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 LMO7Q8WWI1 1683 aa14.97□□□□□ -0.01
RAB3D-201ENST00000222120 CCDC169A6NNP5 214 aa14.96□□□□□ -0.01
RAB3D-201ENST00000222120 SLC10A5Q5PT55 438 aa14.96□□□□□ -0.01
RAB3D-201ENST00000222120 KCTD16Q68DU8 428 aa14.96□□□□□ -0.01
RAB3D-201ENST00000222120 RETREG2Q8NC44 543 aa14.96□□□□□ -0.01
RAB3D-201ENST00000222120 CCDC17Q96LX7 622 aa14.96□□□□□ -0.01
RAB3D-201ENST00000222120 SPZ1Q9BXG8 430 aa14.96□□□□□ -0.01
RAB3D-201ENST00000222120 DUSP10Q9Y6W6 482 aa14.96□□□□□ -0.01
RAB3D-201ENST00000222120 ZBTB5O15062 677 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms