RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 NELFBQ8WX92 580 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 IQCGQ9H095 443 aaKnown RBP15.11■□□□□ 0.01
SIX4-201ENST00000216513 PCIF1Q9H4Z3 704 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 GOLGA6AQ9NYA3 693 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 PCDHA6Q9UN73 950 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 SUGT1Q9Y2Z0 365 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 PCDHA8Q9Y5H6 950 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 U2AF2P26368 475 aaKnown RBP eCLIP15.11■□□□□ 0.01
SIX4-201ENST00000216513 CACTINQ8WUQ7 758 aaKnown RBP15.11■□□□□ 0.01
SIX4-201ENST00000216513 CCDC94Q9BW85 323 aaPredicted RBP15.11■□□□□ 0.01
SIX4-201ENST00000216513 NRKQ7Z2Y5 1582 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 NCOA3Q9Y6Q9 1424 aa15.11■□□□□ 0.01
SIX4-201ENST00000216513 PTGDRQ13258 359 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 PPP1R7Q15435 360 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 ATP11BQ9Y2G3 1177 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 GSPT1P15170 499 aaKnown RBP15.1■□□□□ 0.01
SIX4-201ENST00000216513 RNF180Q86T96 592 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 TAB3Q8N5C8 712 aaPredicted RBP15.1■□□□□ 0.01
SIX4-201ENST00000216513 TMEM47Q9BQJ4 181 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 NXF1Q9UBU9 619 aaKnown RBP15.1■□□□□ 0.01
SIX4-201ENST00000216513 ARHGEF37A1IGU5 675 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 ATP2A1O14983 1001 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 PSMD2Q13200 908 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 SREK1Q8WXA9 508 aaKnown RBP15.1■□□□□ 0.01
SIX4-201ENST00000216513 OSBPL5Q9H0X9 879 aaPredicted RBP15.1■□□□□ 0.01
SIX4-201ENST00000216513 SERTAD1Q9UHV2 236 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 PPP2R5CQ13362 524 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 SEL1L2Q5TEA6 688 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 RHPN2Q8IUC4 686 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 STRBPQ96SI9 672 aaKnown RBP15.1■□□□□ 0.01
SIX4-201ENST00000216513 ZNF302Q9NR11 478 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 ERCC5P28715 1186 aaPredicted RBP15.1■□□□□ 0.01
SIX4-201ENST00000216513 FOXO4P98177 505 aa15.1■□□□□ 0.01
SIX4-201ENST00000216513 STAMBPO95630 424 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 EFCC1Q9HA90 598 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 SLC39A2Q9NP94 309 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 VPS18Q9P253 973 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 GDAQ9Y2T3 454 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 ZNF827Q17R98 1081 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 GNASQ5JWF2 1037 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 APOA5Q6Q788 366 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 BANK1Q8NDB2 785 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 FAM151AQ8WW52 585 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 RPF1Q9H9Y2 349 aaKnown RBP15.09■□□□□ 0.01
SIX4-201ENST00000216513 ODF2LQ9ULJ1 636 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 TRPM1Q7Z4N2 1603 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 ADM5C9JUS6 153 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 ZBTB5O15062 677 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 TRIM50Q86XT4 487 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 YAF2Q8IY57 180 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 CTTNBP2NLQ9P2B4 639 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 XRCC5P13010 732 aaKnown RBP15.09■□□□□ 0.01
SIX4-201ENST00000216513 POSTNQ15063 836 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 USP17L6PQ6QN14 398 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 PPM1KQ8N3J5 372 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 GOLGA5Q8TBA6 731 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 STAG1Q8WVM7 1258 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 TCP11Q8WWU5 503 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 TAB2Q9NYJ8 693 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 DCCP43146 1447 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 PDIA3P30101 505 aaKnown RBP15.09■□□□□ 0.01
SIX4-201ENST00000216513 DEFB115Q30KQ5 88 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 VWA3BQ502W6 1294 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 THNSL1Q8IYQ7 743 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 OPTNQ96CV9 577 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 NEXMIFQ5QGS0 1516 aa15.09■□□□□ 0.01
SIX4-201ENST00000216513 RRP9O43818 475 aaKnown RBP15.08■□□□□ 0.01
SIX4-201ENST00000216513 HSF2BPO75031 334 aa15.08■□□□□ 0.01
SIX4-201ENST00000216513 CXCL9Q07325 125 aa15.08■□□□□ 0.01
SIX4-201ENST00000216513 BFSP1Q12934 665 aa15.08■□□□□ 0.01
SIX4-201ENST00000216513 CAVIN2O95810 425 aa15.08■□□□□ 0.01
SIX4-201ENST00000216513 KRT83P78385 493 aa15.08■□□□□ 0.01
SIX4-201ENST00000216513 KRT81Q14533 505 aa15.08■□□□□ 0.01
SIX4-201ENST00000216513 FAM149B1Q96BN6 582 aa15.08■□□□□ 0.01
SIX4-201ENST00000216513 INTS4Q96HW7 963 aaKnown RBP15.08■□□□□ 0.01
SIX4-201ENST00000216513 FNDC3AQ9Y2H6 1198 aaKnown RBP15.08■□□□□ 0.01
SIX4-201ENST00000216513 SWSAP1Q6NVH7 229 aa15.08■□□□□ 0
SIX4-201ENST00000216513 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.08■□□□□ 0
SIX4-201ENST00000216513 TTC14Q96N46 770 aa15.08■□□□□ 0
SIX4-201ENST00000216513 LMCD1Q9NZU5 365 aa15.08■□□□□ 0
SIX4-201ENST00000216513 ATP8B3O60423 1300 aa15.08■□□□□ 0
SIX4-201ENST00000216513 KIF2AO00139 706 aaPredicted RBP15.08■□□□□ 0
SIX4-201ENST00000216513 CYP21A2P08686 494 aa15.08■□□□□ 0
SIX4-201ENST00000216513 RGS2P41220 211 aa15.08■□□□□ 0
SIX4-201ENST00000216513 BSPRYQ5W0U4 402 aa15.08■□□□□ 0
SIX4-201ENST00000216513 NOC2LQ9Y3T9 749 aaKnown RBP15.08■□□□□ 0
SIX4-201ENST00000216513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.08■□□□□ 0
SIX4-201ENST00000216513 ZNF202O95125 648 aa15.08■□□□□ 0
SIX4-201ENST00000216513 FAM167AQ96KS9 214 aa15.08■□□□□ 0
SIX4-201ENST00000216513 PPANQ9NQ55 473 aaKnown RBP15.08■□□□□ 0
SIX4-201ENST00000216513 MYO1EQ12965 1108 aa15.07■□□□□ 0
SIX4-201ENST00000216513 ATRIPQ8WXE1 791 aa15.07■□□□□ 0
SIX4-201ENST00000216513 SEPT10Q9P0V9 454 aa15.07■□□□□ 0
SIX4-201ENST00000216513 CTAGE15A4D2H0 777 aa15.07■□□□□ 0
SIX4-201ENST00000216513 PLEKHA8P1O95397 391 aa15.07■□□□□ 0
SIX4-201ENST00000216513 CTAGE8P0CG41 777 aa15.07■□□□□ 0
SIX4-201ENST00000216513 NBPF9Q3BBW0 867 aa15.07■□□□□ 0
SIX4-201ENST00000216513 CTAGE6Q86UF2 777 aa15.07■□□□□ 0
SIX4-201ENST00000216513 CTAGE4Q8IX94 777 aa15.07■□□□□ 0
SIX4-201ENST00000216513 INO80Q9ULG1 1556 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms