RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CCDC51Q96ER9 411 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 SUN2Q9UH99 717 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 PCDHA12Q9UN75 941 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 MYO1FO00160 1098 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 GYG2O15488 501 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 UFL1O94874 794 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 KITP10721 976 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 MT-ND3P03897 115 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 TCP1P17987 556 aaKnown RBP15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 EPHB1P54762 984 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 AARS2Q5JTZ9 985 aaKnown RBP15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 NOSTRINQ8IVI9 506 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 ANKRD44Q8N8A2 993 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 TEKT4Q8WW24 435 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 EPB41L5Q9HCM4 733 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 WDR47O94967 919 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 CXCR5P32302 372 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 PIK3R5Q8WYR1 880 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 KCNJ14Q9UNX9 436 aa15.79■□□□□ 0.12
SPTLC2-201ENST00000216484 MAPK4P31152 587 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 C1orf228Q6PIY5 440 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 RGS9BPQ6ZS82 235 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 ICA1LQ8NDH6 482 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 DIABLOQ9NR28 239 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 EXOC1LA0A1B0GW35 172 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 IGBP1P78318 339 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 LLGL1Q15334 1064 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 TMCC1O94876 653 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 CADPS2Q86UW7 1296 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 DAB1O75553 588 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 PYGBP11216 843 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 CTDSPL2Q05D32 466 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 TRAF7Q6Q0C0 670 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 LVRNQ6Q4G3 990 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 HDDC2Q7Z4H3 204 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 MYL10Q9BUA6 226 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 PTPN23Q9H3S7 1636 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 HSPA1AP0DMV8 641 aaKnown RBP15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 HSPA1BP0DMV9 641 aaKnown RBP15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 SERPINB10P48595 397 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 PTK2Q05397 1052 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 PPP2R2CQ9Y2T4 447 aa15.78■□□□□ 0.12
SPTLC2-201ENST00000216484 BNIP3LO60238 219 aa15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 SUPT3HO75486 399 aa15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 GNPTABQ3T906 1256 aa15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 SLC7A5P2Q9GIP4 190 aa15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 MOSPD1Q9UJG1 213 aa15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 MYO18AQ92614 2054 aaKnown RBP15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 ARMCX5Q6P1M9 558 aa15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 PHF8Q9UPP1 1060 aa15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 LZTS3O60299 673 aaPredicted RBP15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 XKR9Q5GH70 373 aa15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 DIS3L2Q8IYB7 885 aaKnown RBP15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 ASPSCR1Q9BZE9 553 aa15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 TROQ12816 1431 aaPredicted RBP15.77■□□□□ 0.12
SPTLC2-201ENST00000216484 BRD2P25440 801 aaKnown RBP15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 PPARGP37231 505 aaPredicted RBP15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 MYL7Q01449 175 aa15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 LRRC8AQ8IWT6 810 aa15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 ANKRD36BP1Q96IX9 119 aa15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 CALN1Q9BXU9 219 aa15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 KRT7P08729 469 aa15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 DMC1Q14565 340 aa15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 PCDHB15Q9Y5E8 787 aa15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 PAMP19021 973 aa15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 CHMLP26374 656 aa15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 TCIRG1Q13488 830 aa15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 DDX25Q9UHL0 483 aaKnown RBP15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 IBTKQ9P2D0 1353 aaPredicted RBP15.77■□□□□ 0.11
SPTLC2-201ENST00000216484 AARSP49588 968 aaKnown RBP eCLIP15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 MORF4L2Q15014 288 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 ARMC2Q8NEN0 867 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 MYH11P35749 1972 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 IMPDH2P12268 514 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 PLTPP55058 493 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 CDC37L1Q7L3B6 337 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 SNX25Q9H3E2 840 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 WDR7Q9Y4E6 1490 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 MOCS3O95396 460 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 TCF3P15923 654 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 C2orf54Q08AI8 447 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 CC2D2BQ6DHV5 1058 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 SLFN12Q8IYM2 578 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 MTBPQ96DY7 904 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 TRIM33Q9UPN9 1127 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 TMEM232C9JQI7 657 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 GPAA1O43292 621 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 ADCY3O60266 1144 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 SNX2O60749 519 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 ARIH2O95376 493 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 AFPP02771 609 aaKnown RBP15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 MCF2L2Q86YR7 1114 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 C8orf37Q96NL8 207 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 RRAGDQ9NQL2 400 aaPredicted RBP15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 AKT3Q9Y243 479 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 FRMPD2Q68DX3 1309 aaPredicted RBP15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 H0Y3Z8 333 aa15.76■□□□□ 0.11
SPTLC2-201ENST00000216484 KRT17Q04695 432 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms