RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 XPO6Q96QU8 1125 aaKnown RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 MYO1AQ9UBC5 1043 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 CFAP65Q6ZU64 1925 aaKnown RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 A0A1B0GUL7 405 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 LRRIQ4A6NIV6 560 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 BRAFP15056 766 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 KRT72Q14CN4 511 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 FAM47EQ6ZV65 393 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 TTC17Q96AE7 1141 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 DCUN1D1Q96GG9 259 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 CHMP2BQ9UQN3 213 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 ZNF713Q8N859 430 aaPredicted RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 LRRC46Q96FV0 321 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 SMYD2Q9NRG4 433 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 DISC1Q9NRI5 854 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 LRRC14BA6NHZ5 514 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 PYGBP11216 843 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 HSD3B2P26439 372 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 CEP55Q53EZ4 464 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 PALB2Q86YC2 1186 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 QTRT2Q9H974 415 aaKnown RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 ZFYVE28Q9HCC9 887 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 ECHDC1Q9NTX5 307 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 SSTR3P32745 418 aaPredicted RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 LETM2Q2VYF4 491 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 PHLDB3Q6NSJ2 640 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 NSUN7Q8NE18 718 aaKnown RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 MAGEB5Q9BZ81 275 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 NEK6Q9HC98 313 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 KCNH3Q9ULD8 1083 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 PCDH11XQ9BZA7 1347 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 PCDH11YQ9BZA8 1340 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 H7C0C1 242 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 SLC9A1P19634 815 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 GTF2E2P29084 291 aaKnown RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 PTPN9P43378 593 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 ATP5OP48047 213 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 RNF10Q8N5U6 811 aaKnown RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 ACTR5Q9H9F9 607 aaPredicted RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 ATG3Q9NT62 314 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 FAM83GA6ND36 823 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 RNASEH1O60930 286 aaKnown RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 ZSCAN23Q3MJ62 389 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 RC3H1Q5TC82 1133 aaKnown RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 FAM196AQ6ZSG2 479 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 RELL1Q8IUW5 271 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 TCP10L2B9ZVM9 353 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 ESRRGP62508 458 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 HSPH1Q92598 858 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 ZNF274Q96GC6 653 aaPredicted RBP3.73□□□□□ -1.81
NEB-201ENST00000172853 SH3BP1Q9Y3L3 701 aa3.73□□□□□ -1.81
NEB-201ENST00000172853 GOLGA8TH3BQL2 631 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 GOLGA8HP0CJ92 632 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 NRBF2Q96F24 287 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 AHCYL2Q96HN2 611 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 RAB17Q9H0T7 212 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ASCC2Q9H1I8 757 aaPredicted RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 EFCC1Q9HA90 598 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ARHGAP26Q9UNA1 814 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 SYNJ2BP-COX16A0A087WUM0 186 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 RNASE9P60153 205 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 MAP3K10Q02779 954 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 NBPF1Q3BBV0 1214 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ERICH1Q86X53 443 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 GMCL1Q96IK5 515 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 COX16Q9P0S2 106 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CPSF2Q9P2I0 782 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 KDM6BO15054 1643 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 PRR29P0C7W0 189 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TRIP4Q15650 581 aaPredicted RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 C11orf88Q6PI97 169 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 NLRP9Q7RTR0 991 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TFB1MQ8WVM0 346 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 PGBD4Q96DM1 585 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 NLRP4Q96MN2 994 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ARHGAP6O43182 974 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 LONP1P36776 959 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 PDE6CP51160 858 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CC2D2BQ6DHV5 1058 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ZNF654Q8IZM8 581 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 DNAAF3Q8N9W5 541 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 ZMYM3Q14202 1370 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 STXBP3O00186 592 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 AKT1P31749 480 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 SNX1Q13596 522 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 CAPRIN1Q14444 709 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 TSC22D1Q15714 1073 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 IQCDQ96DY2 449 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TRIM8Q9BZR9 551 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 RIPOR2Q9Y4F9 1068 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TARSL2A2RTX5 802 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 TBC1D9Q6ZT07 1266 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 SEPT9Q9UHD8 586 aaPredicted RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 HECW1Q76N89 1606 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 PTGS1P23219 599 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 TMED8Q6PL24 325 aaPredicted RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 IFNL3Q8IZI9 196 aa3.72□□□□□ -1.81
NEB-201ENST00000172853 NAF1Q96HR8 494 aaKnown RBP3.72□□□□□ -1.81
NEB-201ENST00000172853 HES6Q96HZ4 224 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms