RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 TBC1D31Q96DN5 1066 aa22.14■■□□□ 1.14
PPP1R3F-201ENST00000055335 DYNLL2Q96FJ2 89 aa22.14■■□□□ 1.14
PPP1R3F-201ENST00000055335 MTA3Q9BTC8 594 aa22.14■■□□□ 1.14
PPP1R3F-201ENST00000055335 FSBPO95073 299 aa22.14■■□□□ 1.13
PPP1R3F-201ENST00000055335 CNNM4Q6P4Q7 775 aa22.14■■□□□ 1.13
PPP1R3F-201ENST00000055335 USP17L3A6NCW0 530 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 USP17L4A6NCW7 530 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 NAPAP54920 295 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 SPRED3Q2MJR0 410 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 USP17L1Q7RTZ2 530 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 CPLX4Q7Z7G2 160 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 TEX2Q8IWB9 1127 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 NELFCDQ8IXH7 590 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 TRAF5O00463 557 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 SLC9C1Q4G0N8 1177 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 PIK3R5Q8WYR1 880 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 CALML4Q96GE6 196 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 NOVA2Q9UNW9 492 aaKnown RBP22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 USP17L8P0C7I0 530 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 CCDC84Q86UT8 332 aaPredicted RBP22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 C1orf167Q5SNV9 1468 aa22.13■■□□□ 1.13
PPP1R3F-201ENST00000055335 A6NNZ2 444 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 PHF20L1A8MW92 1017 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 QPCTQ16769 361 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 TUBB8Q3ZCM7 444 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 MKNK2Q9HBH9 465 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 SIK3Q9Y2K2 1263 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 FAM107AO95990 144 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 AMPD3Q01432 767 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 FAM133AQ8N9E0 248 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 LSM14BQ9BX40 385 aaKnown RBP22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 CEP83Q9Y592 693 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 OR52Z1P0C646 297 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 PRLRP16471 622 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 EPS15P42566 896 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 MAN2A1Q16706 1144 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 SV2BQ7L1I2 683 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 DDX47Q9H0S4 455 aaKnown RBP22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 DPH5Q9H2P9 285 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 VCPKMTQ9H867 229 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 TFCP2L1Q9NZI6 479 aa22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 BIN2Q9UBW5 565 aaPredicted RBP22.12■■□□□ 1.13
PPP1R3F-201ENST00000055335 OPLAHO14841 1288 aa22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 NEDD9Q14511 834 aa22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 CCDC152Q4G0S7 254 aa22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 SFMBT2Q5VUG0 894 aa22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 ADAT2Q7Z6V5 191 aaKnown RBP22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 CACNB1Q02641 598 aaPredicted RBP22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 GDF3Q9NR23 364 aa22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 LAMB4A4D0S4 1761 aa22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 PKD1L3Q7Z443 1732 aa22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 MYCNP04198 464 aaPredicted RBP22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 CAVIN4Q5BKX8 364 aa22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 CCSER1Q9C0I3 900 aa22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 ANAPC4Q9UJX5 808 aa22.11■■□□□ 1.13
PPP1R3F-201ENST00000055335 BCL9LQ86UU0 1499 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 A0A1W2PQJ5 194 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 TLDC2A0PJX2 215 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 HSD17B3P37058 310 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 TNNC1P63316 161 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 IFFO1Q0D2I5 559 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 ITGB3BPQ13352 177 aaPredicted RBP22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 MDM1Q8TC05 714 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 GOPCQ9HD26 462 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 DDX20Q9UHI6 824 aaKnown RBP22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 KIF1AQ12756 1690 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 GMNCA6NCL1 334 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 PPP1R12BO60237 982 aaPredicted RBP22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 MARCH6O60337 910 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 BICDL1Q6ZP65 573 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 SLC4A9Q96Q91 983 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 BAIAP2L1Q9UHR4 511 aa22.1■■□□□ 1.13
PPP1R3F-201ENST00000055335 DCDC2CA8MYV0 355 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 HMGB1P1B2RPK0 211 aaPredicted RBP22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 ITIH3Q06033 890 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 SNCBQ16143 134 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 KRT71Q3SY84 523 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 PDXDC1Q6P996 788 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 SPATS2Q86XZ4 545 aaKnown RBP22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 GJA10Q969M2 543 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 DCP1AQ9NPI6 582 aaPredicted RBP22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 NIP7Q9Y221 180 aaKnown RBP eCLIP22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 ADAMTS7Q9UKP4 1686 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 CDK17Q00537 523 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 KLHL30Q0D2K2 578 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 SLC44A5Q8NCS7 719 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 A0A087X0T9 212 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 MYMKA6NI61 221 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 DNM1LO00429 736 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 FAM228BP0C875 321 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 ERVK-9P63128 1117 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 GLE1Q53GS7 698 aaKnown RBP22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 FAM83BQ5T0W9 1011 aa22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 ZSCAN29Q8IWY8 852 aaPredicted RBP22.09■■□□□ 1.13
PPP1R3F-201ENST00000055335 MAGOHP61326 146 aaKnown RBP22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 PRPF4BQ13523 1007 aaKnown RBP22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 RPS6KA1Q15418 735 aa22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 ARFGAP2Q8N6H7 521 aa22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 BAP1Q92560 729 aa22.08■■□□□ 1.13
PPP1R3F-201ENST00000055335 MAGOHBQ96A72 148 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms