RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 GUF1Q8N442 669 aaKnown RBP9.21□□□□□ -0.93
VAMP3-201ENST00000054666 ERMNQ8TAM6 284 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 DDX12PQ92771 950 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 HAS1Q92839 578 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 PCMTD1Q96MG8 357 aaPredicted RBP9.21□□□□□ -0.93
VAMP3-201ENST00000054666 ARID3AQ99856 593 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 DUSP9Q99956 384 aaKnown RBP9.21□□□□□ -0.93
VAMP3-201ENST00000054666 NOC4LQ9BVI4 516 aaKnown RBP9.21□□□□□ -0.93
VAMP3-201ENST00000054666 NUP58Q9BVL2 599 aa9.21□□□□□ -0.93
VAMP3-201ENST00000054666 LUC7L2Q9Y383 392 aaKnown RBP9.21□□□□□ -0.93
VAMP3-201ENST00000054666 CYP3A7-CYP3A51PA0A087WV96 503 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 B4DLN1 442 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 PSMD14O00487 310 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 SSBP05455 408 aaKnown RBP eCLIP9.21□□□□□ -0.94
VAMP3-201ENST00000054666 TRIM21P19474 475 aaKnown RBP9.21□□□□□ -0.94
VAMP3-201ENST00000054666 CYP3A7P24462 503 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 LRRC63Q05C16 580 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 ELF2Q15723 593 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 HYIQ5T013 277 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 ANKRD40Q6AI12 368 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 RETREG2Q8NC44 543 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 FAM151AQ8WW52 585 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 IQCDQ96DY2 449 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 CCDC94Q9BW85 323 aaPredicted RBP9.21□□□□□ -0.94
VAMP3-201ENST00000054666 SH2D4AQ9H788 454 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 KCNMB3Q9NPA1 279 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 LZTFL1Q9NQ48 299 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.21□□□□□ -0.94
VAMP3-201ENST00000054666 STK24Q9Y6E0 443 aa9.21□□□□□ -0.94
VAMP3-201ENST00000054666 V9GYY5 206 aaPredicted RBP9.21□□□□□ -0.94
VAMP3-201ENST00000054666 TBX3O15119 743 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 RAD17O75943 681 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 KIF20AO95235 890 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 BAG6P46379 1132 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 TBC1D8BQ0IIM8 1120 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 PRR16Q569H4 304 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 CENPPQ6IPU0 288 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 BTNL9Q6UXG8 535 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 SIAH1Q8IUQ4 282 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 TEX2Q8IWB9 1127 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 CCDC65Q8IXS2 484 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 NIM1KQ8IY84 436 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 ZNF397Q8NF99 534 aaPredicted RBP9.2□□□□□ -0.94
VAMP3-201ENST00000054666 OR8K1Q8NGG5 319 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 MRPL44Q9H9J2 332 aaKnown RBP9.2□□□□□ -0.94
VAMP3-201ENST00000054666 VEZTQ9HBM0 779 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 ZNHIT6Q9NWK9 470 aaKnown RBP9.2□□□□□ -0.94
VAMP3-201ENST00000054666 ZNF70Q9UC06 446 aaPredicted RBP9.2□□□□□ -0.94
VAMP3-201ENST00000054666 ABCB11O95342 1321 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 MEIS2O14770 477 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 IPO7O95373 1038 aaKnown RBP9.2□□□□□ -0.94
VAMP3-201ENST00000054666 KRT18P05783 430 aaKnown RBP9.2□□□□□ -0.94
VAMP3-201ENST00000054666 VIL1P09327 827 aaKnown RBP9.2□□□□□ -0.94
VAMP3-201ENST00000054666 SREBF1P36956 1147 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 SNAP25P60880 206 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 COASYQ13057 564 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 SPDYE2Q495Y8 402 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 FAM26FQ5R3K3 315 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 MYOCDQ8IZQ8 938 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 SPICE1Q8N0Z3 855 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 ZNF507Q8TCN5 953 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 HPS3Q969F9 1004 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 MBOAT7Q96N66 472 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 NUDT12Q9BQG2 462 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 VPS33BQ9H267 617 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 ZNF277Q9NRM2 450 aaPredicted RBP9.2□□□□□ -0.94
VAMP3-201ENST00000054666 ZBTB21Q9ULJ3 1066 aa9.2□□□□□ -0.94
VAMP3-201ENST00000054666 TTC26A0AVF1 554 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 POTEB3A0JP26 581 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 POTECB2RU33 542 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 ZNF76P36508 570 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 ERVK-24P63145 666 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 NAA30Q147X3 362 aaPredicted RBP9.19□□□□□ -0.94
VAMP3-201ENST00000054666 Q4G0T1 1027 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 FOXR2Q6PJQ5 311 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 POTEBQ6S5H4 581 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 KCNK18Q7Z418 384 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 UBXN4Q92575 508 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 GJA10Q969M2 543 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 WDR24Q96S15 920 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 DNAJC7Q99615 494 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 SEMA6BQ9H3T3 888 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 EHMT1Q9H9B1 1298 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 PANK4Q9NVE7 773 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 PRR12Q9ULL5 1215 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 CAPN11Q9UMQ6 739 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 PLA2G4BP0C869 781 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 MMP14P50281 582 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 MAN2A1Q16706 1144 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 FKBP1CQ5VVH2 108 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 NCAPH2Q6IBW4 605 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 GPBP1Q86WP2 473 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 ACRBPQ8NEB7 543 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 AGBL3Q8NEM8 1001 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 CHURC1Q8WUH1 139 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 EEF2KMTQ96G04 330 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 FAM20AQ96MK3 541 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 TMX2Q9Y320 296 aa9.19□□□□□ -0.94
VAMP3-201ENST00000054666 A0A1W2PRG0 241 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms