RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 AMPD3Q01432 767 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 KRT79Q5XKE5 535 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 HDXQ7Z353 690 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 OR8K1Q8NGG5 319 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 C7orf25Q9BPX7 421 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 POLD4Q9HCU8 107 aa14.63□□□□□ -0.07
CTNS-201ENST00000046640 ADAMTSL1Q8N6G6 1762 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 TNNT3P45378 269 aaPredicted RBP14.62□□□□□ -0.07
CTNS-201ENST00000046640 C2CD5Q86YS7 1000 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 SPICE1Q8N0Z3 855 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 ZNF507Q8TCN5 953 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 CUL5Q93034 780 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 DHTKD1Q96HY7 919 aaPredicted RBP14.62□□□□□ -0.07
CTNS-201ENST00000046640 TRIM34Q9BYJ4 488 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 THAP9Q9H5L6 903 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 TDRD3Q9H7E2 651 aaKnown RBP14.62□□□□□ -0.07
CTNS-201ENST00000046640 PCDHA1Q9Y5I3 950 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 EPN1Q9Y6I3 576 aaPredicted RBP14.62□□□□□ -0.07
CTNS-201ENST00000046640 ZBTB5O15062 677 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 EEF1GP26641 437 aaKnown RBP14.62□□□□□ -0.07
CTNS-201ENST00000046640 STAT3P40763 770 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 CYP27A1Q02318 531 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 TSR1Q2NL82 804 aaKnown RBP14.62□□□□□ -0.07
CTNS-201ENST00000046640 QRICH1Q2TAL8 776 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 CERKLQ49MI3 558 aaPredicted RBP14.62□□□□□ -0.07
CTNS-201ENST00000046640 FOXR1Q6PIV2 292 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 DDX12PQ92771 950 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 HAS1Q92839 578 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 ZHX3Q9H4I2 956 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 KANSL2Q9H9L4 492 aa14.62□□□□□ -0.07
CTNS-201ENST00000046640 REXO2Q9Y3B8 237 aaKnown RBP14.62□□□□□ -0.07
CTNS-201ENST00000046640 NPHP3-ACAD11A0A0J9YXS1 232 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 ESYT2A0FGR8 921 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 NDUFA10O95299 355 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 SMARCA1P28370 1054 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 PDE6BP35913 854 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 FAM193AP78312 1265 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 AOC3Q16853 763 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 WDR59Q6PJI9 974 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 SH3BP5LQ7L8J4 393 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 CCDC155Q8N6L0 562 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 CCDC51Q96ER9 411 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 MASTLQ96GX5 879 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 RIC8AQ9NPQ8 531 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 FAM207AQ9NSI2 230 aaPredicted RBP14.61□□□□□ -0.07
CTNS-201ENST00000046640 MYO6Q9UM54 1294 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 RASSF10A6NK89 507 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 E9PMD0 336 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 ERLIN1O75477 346 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 ARHGAP25P42331 645 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 MRPS25P82663 173 aaKnown RBP14.61□□□□□ -0.07
CTNS-201ENST00000046640 CASP8Q14790 479 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 CNNM4Q6P4Q7 775 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 GSPT2Q8IYD1 628 aaKnown RBP14.61□□□□□ -0.07
CTNS-201ENST00000046640 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 CUEDC2Q9H467 287 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 FAM198AQ9UFP1 575 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 SWAP70Q9UH65 585 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 PCDHA12Q9UN75 941 aa14.61□□□□□ -0.07
CTNS-201ENST00000046640 MAP2K7O14733 419 aa14.6□□□□□ -0.07
CTNS-201ENST00000046640 ECE2O60344 883 aa14.6□□□□□ -0.07
CTNS-201ENST00000046640 MYL1P05976 194 aa14.6□□□□□ -0.07
CTNS-201ENST00000046640 MRPL12P52815 198 aaKnown RBP14.6□□□□□ -0.07
CTNS-201ENST00000046640 SLFN13Q68D06 897 aa14.6□□□□□ -0.07
CTNS-201ENST00000046640 TMC4Q7Z404 712 aa14.6□□□□□ -0.07
CTNS-201ENST00000046640 PLEKP08567 350 aaPredicted RBP14.6□□□□□ -0.07
CTNS-201ENST00000046640 DNM2P50570 870 aa14.6□□□□□ -0.07
CTNS-201ENST00000046640 HHIPL2Q6UWX4 724 aa14.6□□□□□ -0.07
CTNS-201ENST00000046640 SLC30A10Q6XR72 485 aa14.6□□□□□ -0.07
CTNS-201ENST00000046640 FGFBP2Q9BYJ0 223 aa14.6□□□□□ -0.07
CTNS-201ENST00000046640 DUSP10Q9Y6W6 482 aa14.6□□□□□ -0.07
CTNS-201ENST00000046640 BICDL2A1A5D9 508 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 LRRIQ3A6PVS8 624 aaPredicted RBP14.59□□□□□ -0.07
CTNS-201ENST00000046640 TULP2O00295 520 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 EPHB6O15197 1021 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 JAG1P78504 1218 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 MIIPQ5JXC2 388 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 NELFCDQ8IXH7 590 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 RAD54LQ92698 747 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 MMRN2Q9H8L6 949 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 L1RE1Q9UN81 338 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 KIAA1024Q9UPX6 916 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 FXR2P51116 673 aaKnown RBP eCLIP14.59□□□□□ -0.07
CTNS-201ENST00000046640 TRIM14Q14142 442 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 CDC37Q16543 378 aaPredicted RBP14.59□□□□□ -0.07
CTNS-201ENST00000046640 HSP90B2PQ58FF3 399 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 RIN2Q8WYP3 895 aaPredicted RBP14.59□□□□□ -0.07
CTNS-201ENST00000046640 RAB34Q9BZG1 259 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 TANGO6Q9C0B7 1094 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 CAPN11Q9UMQ6 739 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 POTEB3A0JP26 581 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 POTECB2RU33 542 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 ATP1A1P05023 1023 aaKnown RBP14.59□□□□□ -0.07
CTNS-201ENST00000046640 HOXA13P31271 388 aaPredicted RBP14.59□□□□□ -0.07
CTNS-201ENST00000046640 CCDC122Q5T0U0 273 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 GPATCH4Q5T3I0 446 aaKnown RBP14.59□□□□□ -0.07
CTNS-201ENST00000046640 POTEBQ6S5H4 581 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 KRT26Q7Z3Y9 468 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 SUGT1Q9Y2Z0 365 aa14.59□□□□□ -0.07
CTNS-201ENST00000046640 PLIN4Q96Q06 1357 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms