RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 HHIPL2Q6UWX4 724 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 SLC44A5Q8NCS7 719 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 MAIP1Q8WWC4 291 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 MYO1AQ9UBC5 1043 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 FCER1AP12319 257 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 BPIFB4P59827 614 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 PPM1KQ8N3J5 372 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 NSUN4Q96CB9 384 aaKnown RBP11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 MTFR1LQ9H019 292 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 TSKSQ9UJT2 592 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 DAGLAQ9Y4D2 1042 aa11.37□□□□□ -0.59
NIPAL3-201ENST00000003912 ACTN4O43707 911 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 ABL1P00519 1130 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 MTMR1Q13613 665 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 ALCAMQ13740 583 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 SPATA1Q5VX52 437 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 DEFB132Q7Z7B7 95 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 IFT81Q8WYA0 676 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 MMP19Q99542 508 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 RBSNQ9H1K0 784 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 ACAD9Q9H845 621 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 RIC8AQ9NPQ8 531 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 PSMC2P35998 433 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 ARL6IP4Q66PJ3 421 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 NEDD1Q8NHV4 660 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 TBC1D22BQ9NU19 505 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 ORC4O43929 436 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 NEDD9Q14511 834 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 GRM4Q14833 912 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 TYW1BQ6NUM6 668 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 PNMA8AQ86V59 439 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 DHTKD1Q96HY7 919 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 FAM81BQ96LP2 452 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 TIGD1Q96MW7 591 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 KIAA1210Q9ULL0 1709 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 GSG1L2A8MUP6 293 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 TTLL4Q14679 1199 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 PFKFB3Q16875 520 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 U2AF1L4Q8WU68 220 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 PAIP2Q9BPZ3 127 aaKnown RBP11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 OSBPL5Q9H0X9 879 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 PARVGQ9HBI0 331 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 POLR3GO15318 223 aaPredicted RBP11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 OR8K1Q8NGG5 319 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 NT5C1BQ96P26 610 aa11.36□□□□□ -0.59
NIPAL3-201ENST00000003912 MEIS1O00470 390 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 STAM2O75886 525 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 STAT3P40763 770 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 MYL7Q01449 175 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 SURF1Q15526 300 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 KIAA1841Q6NSI8 718 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 ENAHQ8N8S7 591 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 NR2F2P24468 414 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 MFAP3P55082 362 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 HADHQ16836 314 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 PEX26Q7Z412 305 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 NSRP1Q9H0G5 558 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 ELP3Q9H9T3 547 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 PHLPP2Q6ZVD8 1323 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 STK36Q9NRP7 1315 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 PTPREP23469 700 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 ZNF827Q17R98 1081 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 IFIH1Q9BYX4 1025 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 ZNF70Q9UC06 446 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 CEMIPQ8WUJ3 1361 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 C19orf81C9J6K1 198 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 PSMD14O00487 310 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 PLA2G4BP0C869 781 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 KIF11P52732 1056 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 KRT76Q01546 638 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 CUL4AQ13619 759 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 EXOC3L4Q17RC7 722 aa11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 GPBP1L1Q9HC44 474 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-201ENST00000003912 SLFN14P0C7P3 912 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 LMNB1P20700 586 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 GMPSP49915 693 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 PTK2Q05397 1052 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 SCARF1Q14162 830 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 RPS6KA1Q15418 735 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 C12orf60Q5U649 245 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 ELMSAN1Q6PJG2 1045 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 RPAP3Q9H6T3 665 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 SRPRBQ9Y5M8 271 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 ASB14A6NK59 587 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 WDR64B1ANS9 1081 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 MARK3P27448 753 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 TGFB2P61812 414 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 PSMD2Q13200 908 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 PDZD4Q76G19 769 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 AGBL3Q8NEM8 1001 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 UBE2Q2Q8WVN8 375 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 SNX25Q9H3E2 840 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 GABPAQ06546 454 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 SLFNL1Q499Z3 407 aa11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 INTS5Q6P9B9 1019 aaKnown RBP11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
NIPAL3-201ENST00000003912 FAM186BQ8IYM0 893 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms