RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Pabpc6Q9D4E6 643 aaKnown RBP12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Elf2Q9JHC9 593 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Magi2Q9WVQ1 1275 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Fem1bQ9Z2G0 627 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 PatjQ63ZW7 1834 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Lcmt1A0A0U1RNF2 332 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Stat3P42227 770 aaKnown RBP12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Setd4P58467 439 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Mcm6P97311 821 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 NfibP97863 570 aaKnown RBP12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ttll12Q3UDE2 639 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Pgrmc2Q80UU9 217 aaKnown RBP12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Anks1bQ8BIZ1 1259 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 EhhadhQ9DBM2 718 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Msh3P13705 1091 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Map4k1P70218 827 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Trim9Q8C7M3 817 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 CnstQ8CBC4 711 aa12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Zcchc17Q9ESX4 241 aaKnown RBP12.05□□□□□ -0.48
Lig3-212ENSMUST00000173727 Gm44503E9PYU5 387 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Sval3Q76I99 144 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Siglec10Q80ZE3 688 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 P2ry10Q8BFU7 328 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Appl2Q8K3G9 662 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Dnaaf4Q8R368 420 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Eps8l1Q8R5F8 716 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ppp1r3gQ9CW07 347 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Fzd9Q9R216 592 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Lypla2Q9WTL7 231 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Cul4bA2A432 970 aaKnown RBP12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Pla2g4bP0C871 782 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Psmc2P46471 433 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Tdo2P48776 406 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Samsn1P57725 372 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Kcnb1Q03717 857 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Rbm12b2Q66JV4 834 aaKnown RBP12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Kcnv2Q8CFS6 562 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ints4Q8CIM8 964 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ago4Q8CJF8 861 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Frat2Q8K025 231 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ushbp1Q8R370 680 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 DaglbQ91WC9 669 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 HlcsQ920N2 722 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Vta1Q9CR26 309 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 SerhlQ9EPB5 311 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Nek3Q9R0A5 511 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Slc10a4Q3UEZ8 437 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ccdc84Q4VA36 332 aaKnown RBP12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Coa7Q921H9 231 aa12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Gtpbp4Q99ME9 634 aaKnown RBP12.04□□□□□ -0.48
Lig3-212ENSMUST00000173727 Bpifb4A2BGH0 617 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Mettl14Q3UIK4 456 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ccdc38Q8CDN8 563 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 DnerQ8JZM4 737 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Mical1Q8VDP3 1048 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ddx27Q921N6 760 aaKnown RBP12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Uchl5Q9WUP7 329 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Eif2ak1Q9Z2R9 619 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 PpardP35396 440 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Stim1P70302 685 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Slc2a13Q3UHK1 637 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Abhd15Q5F2F2 459 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ift88Q61371 824 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Krt39Q6IFX4 482 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Adck2Q6NSR3 617 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ireb2Q811J3 963 aaKnown RBP12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Kdm4bQ91VY5 1086 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Pcdha12Q91Y18 950 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Cfap45Q9D9U9 551 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Mkrn1Q9QXP6 481 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Sbf2E9PXF8 1872 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 NpcdF8VQB8 469 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Pak1O88643 545 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Rbm46P86049 533 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ssrp1Q08943 708 aaKnown RBP12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Senp5Q6NXL6 749 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Tmem130Q6NXM3 419 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Ddx19bQ8BZY3 494 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Stard7Q8R1R3 373 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Igf2bp3Q9CPN8 579 aaKnown RBP12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Tmx2Q9D710 295 aaKnown RBP12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Extl2Q9ES89 330 aa12.03□□□□□ -0.48
Lig3-212ENSMUST00000173727 Dnajc25A2ALW5 357 aa12.02□□□□□ -0.48
Lig3-212ENSMUST00000173727 Pus7B7ZNL8 666 aaKnown RBP12.02□□□□□ -0.48
Lig3-212ENSMUST00000173727 Rexo5D3YW29 759 aa12.02□□□□□ -0.48
Lig3-212ENSMUST00000173727 Senp7Q8BUH8 1037 aa12.02□□□□□ -0.48
Lig3-212ENSMUST00000173727 NelfbQ8C4Y3 580 aa12.02□□□□□ -0.48
Lig3-212ENSMUST00000173727 Sulf1Q8K007 870 aa12.02□□□□□ -0.48
Lig3-212ENSMUST00000173727 4932429P05RikA2ADI4 785 aa12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Ttc6G3UYY4 1857 aa12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Adssl1P28650 457 aa12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Gabpb2P81069 414 aa12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Trpc6Q61143 930 aa12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Fkbp3Q62446 224 aaKnown RBP12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Znf532Q6NXK2 1036 aa12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Klhl30Q8C3F7 581 aa12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Serpinb13Q8CDC0 389 aa12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Vmn1r199Q8R280 367 aa12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Fsip1Q9D3V5 435 aa12.02□□□□□ -0.49
Lig3-212ENSMUST00000173727 Pcdh15Q99PJ1 1943 aa12.02□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms