RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Tspan17Q9D7W4 270 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Gtf2iQ9ESZ8 998 aaKnown RBP15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Dynlt1P51807 113 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Pfdn6Q03958 127 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Pabpc4Q6PHQ9 660 aaKnown RBP15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Slc44a1Q6X893 653 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 HomezQ80W88 542 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Slc4a7Q8BTY2 1034 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Mcf2A2AEU1 1111 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Prkg1P0C605 671 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 VdrP48281 422 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Wdr36Q3TAQ9 899 aaKnown RBP15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Wdr27Q8C5V5 780 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Mrpl50Q8VDT9 159 aaKnown RBP15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Ppp2r5dQ91V89 594 aa15.12■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Ttc13A0A1L1SSC7 844 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Pdzd8B9EJ80 1147 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Elmsan1E9Q2I4 1089 aaKnown RBP15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Gad1P48318 593 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Sesn2P58043 480 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Kiaa1468Q148V7 1216 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Acad11Q80XL6 779 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 CgasQ8C6L5 507 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Tcp11l2Q8K1H7 517 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Usp42B2RQC2 1324 aaKnown RBP15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Kcnb2A6H8H5 907 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Rps8P62242 208 aaKnown RBP15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Orc3Q9JK30 715 aaKnown RBP15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 A630010A05RikA9C473 232 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Mroh8E9PYI4 1049 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Hspa1lP16627 641 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Ints9Q8K114 658 aaKnown RBP15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 HibadhQ99L13 335 aaKnown RBP15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 GsnP13020 780 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Nab2Q61127 525 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Zbtb40Q6PCS8 1258 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Dars2Q8BIP0 653 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Clec4gQ8BNX1 294 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Kcnv2Q8CFS6 562 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Dbn1Q9QXS6 706 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Cfap74Q3UY96 1578 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Sycp3P70281 254 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Atg16l1Q8C0J2 607 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Cog5Q8C0L8 829 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Q8CEZ4 452 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Snrnp35Q9D384 244 aa15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 AatfQ9JKX4 526 aaKnown RBP15.11■□□□□ 0.01
Col3a1-201ENSMUST00000087883 A0A286YCQ6 122 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Thumpd3P97770 505 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Zmym1Q3TJB1 983 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Hipk4Q3V016 616 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Ckap2Q3V1H1 664 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Caprin1Q60865 707 aaKnown RBP15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Iqcb1Q8BP00 598 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Usp15Q8R5H1 981 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Arl2bpQ9D385 163 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 EsrraO08580 422 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Pcdha4O88689 947 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Pde6bP23440 856 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Itih3Q61704 889 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Trim28Q62318 834 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Ero1aQ8R180 464 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Srgap2Q91Z67 1071 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Kdm6aO70546 1401 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Ap1g2O88512 791 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Mettl17Q3U2U7 461 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Serpinb10Q8K1K6 397 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 MlklQ9D2Y4 472 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Rtn3Q9ES97 964 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 GdaQ9R111 454 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Gcc2Q8CHG3 1679 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Cep126Q0VBV7 1103 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 4932411N23RikQ8C0S0 470 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Cdk5rap3Q99LM2 503 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Ranbp17Q99NF8 1088 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Dbndd2Q9CRD4 158 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Polr3cQ9D483 533 aa15.1■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Akap5D3YVF0 745 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Anks1aP59672 1150 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Taf1bP97358 586 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Zc3h18Q0P678 948 aaKnown RBP15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Nrbp2Q91V36 499 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Nsmce1Q9D720 266 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 EcsitQ9QZH6 435 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Kif24Q6NWW5 1356 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Rtl9Q32KG4 1339 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Trim5E9PV98 497 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 NppbP40753 121 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Il15P48346 162 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Gbp10Q000W5 611 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Fam178bQ24JP3 464 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Arhgap17Q3UIA2 846 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Sorbs1Q62417 1290 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 PrimpolQ6P1E7 537 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Rasgrp4Q8BTM9 673 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Thoc1Q8R3N6 657 aaKnown RBP15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Pcdhb9E9Q5G2 828 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Gm4340L7N2C4 268 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Cd3dP04235 173 aa15.09■□□□□ 0.01
Col3a1-201ENSMUST00000087883 Irf5P56477 497 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms