RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Rtn2O70622 471 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Lire1P11260 357 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Kcna3P16390 528 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 HelqQ2VPA6 1069 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Zbtb45Q52KG4 520 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Zcchc2Q69ZB8 1166 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ift74Q8BKE9 600 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Proser2Q8C5R2 471 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Wdr37Q8CBE3 496 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 H6pdQ8CFX1 789 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Rassf8Q8CJ96 419 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tmem60Q8K174 133 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 PccaQ91ZA3 724 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tab2Q99K90 693 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 QpctQ9CYK2 362 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Q9DA42 136 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Myh2G3UW82 1942 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Slit2Q9R1B9 1521 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ulk4Q3V129 1303 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ankrd31A0A140LI88 1765 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Rgs2O08849 211 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Lrrc23O35125 340 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Prl7a2O54831 253 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 GpiP06745 558 aaKnown RBP10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Serping1P97290 504 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Fam160a1Q505K2 1081 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 TdrkhQ80VL1 560 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Haus1Q8BHX1 278 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Hirip3Q8BLH7 601 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Sgsm1Q8BPQ7 1093 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 ItpkaQ8R071 459 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ubac1Q8VDI7 409 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Zbtb3Q91X45 518 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tekt2Q922G7 430 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Luc7lQ9CYI4 371 aaKnown RBP10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Polr2dQ9D7M8 142 aaKnown RBP10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 PodxlQ9R0M4 503 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cul1Q9WTX6 776 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cog1Q9Z160 980 aa10.64□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Bmp2P21274 394 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 SpertQ32MG2 446 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 GcgrQ61606 485 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Kcnk18Q6VV64 394 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cpa1Q7TPZ8 419 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Tbl3Q8C4J7 801 aaKnown RBP10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Morc2bQ8C5W4 1022 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ano2Q8CFW1 1002 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Pcolce2Q8R4W6 414 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 NenfQ9CQ45 171 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Apopt1Q9CQW7 192 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Zdhhc13Q9CWU2 622 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Rtl9Q32KG4 1339 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nup153E9Q3G8 1462 aaKnown RBP10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 PtprcP06800 1291 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ephb4P54761 987 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Cplx1P63040 134 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nhej1Q3KNJ2 295 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 HltfQ6PCN7 1003 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 HhatQ8BMT9 499 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Basp1Q91XV3 226 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Kif17Q99PW8 1038 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Snapc4Q8BP86 1333 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 PtprmP28828 1452 aa10.63□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Klhl41A2AUC9 606 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Hmgxb3G3X9M3 1254 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Kif1cO35071 1100 aaKnown RBP10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Nr1i3O35627 358 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 InipQ3TXT3 104 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Armc2Q3URY6 854 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Gm5168Q4KL04 211 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Dhx38Q80X98 1228 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Snip1Q8BIZ6 383 aaKnown RBP10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Bicd1Q8BR07 835 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Taok3Q8BYC6 898 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ccdc17Q8CE13 565 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Slc35c2Q8VCX2 364 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ecel1Q9JMI0 775 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Atp11cQ9QZW0 1129 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 NktrP30415 1453 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Ric1Q69ZJ7 1422 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f15A0A087WR44 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f12A0A0A0MQP3 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f9A2BFZ7 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f7A2BHG6 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f19A2CG71 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f10A2CG92 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f3A2CGC2 496 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f13B8JKF6 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Hsf3D0VYS2 492 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Zfp839E9PUU5 921 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f2J3QMS5 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f25J3QMV9 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f6J3QMW9 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f26J3QNK2 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f24J3QNQ5 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f8J3QQ50 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f17L7MU81 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Btbd35f18L7MU83 498 aa10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 Sept2P42208 361 aaKnown RBP10.62□□□□□ -0.71
Hmgb1-201ENSMUST00000085546 PctpP53808 214 aa10.62□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms