RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Ccdc43Q9CR29 222 aaKnown RBP9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Pfkfb3A7UAK5 555 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Apol7aB2RT54 418 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Krt78E9Q0F0 1068 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Usp35M0QWN7 1009 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 MybP06876 636 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Myl3P09542 204 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ssrp1Q08943 708 aaKnown RBP9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Trim43aQ3TL54 445 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Tbc1d2bQ3U0J8 965 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Hdhd2Q3UGR5 259 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Mars2Q499X9 586 aaKnown RBP9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ccnl1Q52KE7 532 aaKnown RBP9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Znf652Q5DU09 608 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Atf3Q60765 181 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Lrrcc1Q69ZB0 1026 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Gpbp1Q6NXH3 473 aaKnown RBP9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Iws1Q8C1D8 766 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Alg1Q921Q3 482 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Aipl1Q924K1 328 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Eps8l2Q99K30 729 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Ubxn6Q99PL6 442 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Nxnl2Q9D531 156 aa9.09□□□□□ -0.95
Cdc40-201ENSMUST00000044166 Myh3P13541 1940 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Akap11E9Q777 1895 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gm1604bQ3TRG0 118 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Spata5Q3UMC0 893 aaKnown RBP9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Mum1l1Q4VA55 681 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Krt42Q6IFX2 452 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 HelbQ6NVF4 1074 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rasa4Q6PFQ7 802 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 3830417A13RikQ8BQJ2 303 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Slc13a4Q8BZ82 625 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 RadxQ8C779 850 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Eif4a3Q91VC3 411 aaKnown RBP9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Bzw2Q91VK1 419 aaKnown RBP9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Lzts2Q91YU6 671 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 MymkQ9D1N4 221 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Pkd2l2Q9JLG4 621 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Myh8P13542 1937 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Bpifb4A2BGH0 617 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Sec24cG3X972 1096 aaKnown RBP9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Zfp105G3X9I0 524 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Zw10O54692 779 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ncapg2Q6DFV1 1138 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Mettl25Q6NXH8 597 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Slc51bQ80WK2 128 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Pak2Q8CIN4 524 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tmem60Q8K174 133 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Grin3bQ91ZU9 1003 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Eef1gQ9D8N0 437 aaKnown RBP9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gpaa1Q9WTK3 621 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tnrc6cQ3UHC0 1690 aaKnown RBP9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Hnrnph3D3Z3N4 346 aaKnown RBP9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Akr1b10G5E895 316 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Nr1i2O54915 431 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gnat1P20612 350 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 1700013D24RikQ0P521 120 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Slc9a1Q61165 820 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 SrlQ7TQ48 910 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tmem143Q8VD26 458 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Lrrc59Q922Q8 307 aaKnown RBP9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Smc6Q924W5 1097 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Alpk1Q9CXB8 1231 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 IqcdQ9D3V1 458 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 FignQ9ERZ6 759 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Cxcl11Q9JHH5 100 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Pex3Q9QXY9 372 aa9.08□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Vmn2r78K7N6U5 853 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Nat2P50295 290 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tmprss11aQ3UQ41 389 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Rnpc3Q3UZ01 514 aaKnown RBP9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Fkbp3Q62446 224 aaKnown RBP9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Zdhhc14Q8BQQ1 489 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Vcpip1Q8CDG3 1220 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gimap7Q8R379 293 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Dnajc17Q91WT4 303 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ttc13A0A1L1SSC7 844 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tex13cD3YU32 604 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Lrrc23O35125 340 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 HdgfP51859 237 aaKnown RBP9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Sec31aQ3UPL0 1230 aaKnown RBP9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Carmil2Q3V3V9 1296 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Foxn3Q499D0 457 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Klra6Q60653 266 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Wdr44Q6NVE8 915 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Asic1Q6NXK8 526 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gga2Q6P5E6 603 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Naa35Q6PHQ8 725 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Naa15Q80UM3 865 aaKnown RBP9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Gle1Q8R322 699 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 LrmdaQ9D9B4 229 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Cmtr1Q9DBC3 837 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Arl6ip4Q9JM93 229 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Tnfrsf10bQ9QZM4 381 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Greb1lB9EJV3 1913 aa9.07□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Prl2c3P04768 224 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Acsbg2Q2XU92 667 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Ankrd13cQ3UX43 541 aa9.06□□□□□ -0.96
Cdc40-201ENSMUST00000044166 Abl2Q4JIM5 1182 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms