RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Znf638Q61464 1960 aaKnown RBP17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Kcnv2Q8CFS6 562 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Ints4Q8CIM8 964 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Abcc1O35379 1528 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 LdhbP16125 334 aaKnown RBP17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Brd2Q7JJ13 798 aaKnown RBP17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Olfr118Q7TRJ6 321 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Hps3Q91VB4 1002 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 NntQ61941 1086 aaKnown RBP17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Aoc3O70423 765 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 CrklP47941 303 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Polr2fP61219 127 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Gucy2fQ5SDA5 1108 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Popdc2Q9ES82 367 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Apol11bE9PUZ0 337 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Axin2O88566 840 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Pcyt1aP49586 367 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Dennd2cQ6P9P8 914 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Abcc12Q80WJ6 1366 aa17.9■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Rassf9Q8K342 435 aa17.89■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Tom1l2Q5SRX1 507 aa17.89■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Cog5Q8C0L8 829 aa17.89■□□□□ 0.46
Ccdc88a-201ENSMUST00000040182 Mroh8E9PYI4 1049 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 1700113H08RikE9Q9Q5 327 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 AdarQ99MU3 1178 aaKnown RBP17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Fam208aQ69ZR9 1610 aaKnown RBP17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Tmem132dQ76HP3 1097 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Spata4Q8K3V1 295 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Fgd4Q91ZT5 766 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Tmed2Q9R0Q3 201 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Zfp174B9EJW5 407 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gm3415J3QMS8 315 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Lsg1Q3UM18 644 aaKnown RBP17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Oxr1Q4KMM3 866 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gm3404Q9D506 307 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Eps15l1Q60902 907 aaKnown RBP17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Taco1Q8K0Z7 294 aaKnown RBP17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Faf1P54731 649 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Nlrp4fQ66X05 959 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Snip1Q8BIZ6 383 aaKnown RBP17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Rnf14Q9JI90 485 aa17.89■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ccdc88cQ6VGS5 2009 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Rap1gds1E9Q912 607 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Vwa3bJ9JI28 736 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 SrlQ7TQ48 910 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Pip4k2cQ91XU3 421 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Uhrf1bp1lA2RSJ4 1457 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Zbtb38Q3LR78 1197 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 EspnlQ3UYR4 1005 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Map3k12Q60700 888 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Arl4aP61213 200 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Hsdl2Q2TPA8 490 aaKnown RBP17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ciao1Q99KN2 339 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Otud7bB2RUR8 840 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Trpc6Q61143 930 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Fra10ac1Q8BP78 315 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Cdc26Q99JP4 85 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Arhgef40Q3UPH7 1517 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Palb2Q3U0P1 1104 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ovgp1Q62010 721 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 AmotQ8VHG2 1126 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Myo3bQ1EG27 1305 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Foxp2P58463 714 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Vav2Q60992 868 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ipo5Q8BKC5 1097 aaKnown RBP17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ankk1Q8BZ25 745 aa17.88■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 HelbQ6NVF4 1074 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 AacsQ9D2R0 672 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Hyou1Q9JKR6 999 aaKnown RBP17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Igsf3Q6ZQA6 1194 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Me3Q8BMF3 604 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Tgif2lx2Q8K5B9 231 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Rmdn1Q9DCV4 305 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gm43638A0A0J9YU36 694 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Cog4Q8R1U1 785 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Setd3Q91WC0 594 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 IkbkbO88351 757 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Hspd1P63038 573 aaKnown RBP17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Caprin1Q60865 707 aaKnown RBP17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Dctpp1Q9QY93 170 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 GnptabQ69ZN6 1235 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 LnpkQ7TQ95 425 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Dhx38Q80X98 1228 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Slc18a1Q8R090 521 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Pex19Q8VCI5 299 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Nde1Q9CZA6 344 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Arl2bpQ9D385 163 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Jarid2Q62315 1234 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Tmcc1Q69ZZ6 649 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Slc25a24Q8BMD8 475 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Serpinb3bQ9D1Q5 387 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Slc12a7Q9WVL3 1083 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Map3k19E9Q3S4 1311 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gm4841E9QAA8 417 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Rpa3Q9CQ71 121 aa17.87■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Gbp10Q000W5 611 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Q4VA45 678 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 NfkbibQ60778 359 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 CtsqQ91ZF4 343 aa17.86■□□□□ 0.45
Ccdc88a-201ENSMUST00000040182 Ap2b1Q9DBG3 937 aa17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms