RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 LzicQ8K3C3 190 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Map2k2Q63932 401 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Mettl24Q8CCB5 363 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 ParvbQ9ES46 365 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Tlk2O55047 718 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 HnrnprQ8VHM5 632 aaKnown RBP15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Pcdha12Q91Y18 950 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Cuedc2Q9CXX9 284 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Zfyve19Q9DAZ9 389 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 TxkP42682 527 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Mphosph8Q3TYA6 858 aaKnown RBP15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Pank4Q80YV4 820 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Znf428Q8C1M2 176 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Abcb6Q9DC29 842 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Zscan22Q8BGS5 496 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Dars2Q8BIP0 653 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Cd209bQ8CJ91 325 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 VdrP48281 422 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 AmotQ8VHG2 1126 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Rabgef1Q9JM13 491 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Cpb1B2RS76 415 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Serpina3iD3Z450 408 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Pdzrn4E9PUZ9 1014 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Calb1P12658 261 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Ect2Q07139 913 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Trappc10Q3TLI0 1259 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Mettl17Q3U2U7 461 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Cbwd1Q8VEH6 393 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Zscan12Q9Z1D7 501 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Setd1aE9PYH6 1716 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Ankrd42Q3V096 527 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 HltfQ6PCN7 1003 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 NemfQ8CCP0 1064 aaKnown RBP15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Cul7Q8VE73 1689 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 L3mbtl3Q8BLB7 883 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Pcdhb12Q91Y07 789 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Ivns1abpQ920Q8 642 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Pard3bQ9CSB4 1203 aa15.04■□□□□ -0
Col5a1-201ENSMUST00000028280 Gm12185Q5NCB2 835 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Sdr42e1Q9D665 394 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Cul1Q9WTX6 776 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Nccrp1G3X9C2 266 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Tm6sf1P58749 370 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 VrtnQ3SYK4 740 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Adat2Q6P6J0 191 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Kcnk13Q8R1P5 405 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Dnajc10Q9DC23 793 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Fyb2A2A995 729 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Eno3P21550 434 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Foxp1P58462 705 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Rnf207Q3V3A7 635 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Gramd1bQ80TI0 738 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Iqcb1Q8BP00 598 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Anapc4Q91W96 807 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Mms19Q9D071 1031 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Nlrp5Q9R1M5 1163 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Atp8b1Q148W0 1251 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Esco1Q69Z69 843 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 DexiQ9WUQ7 95 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Csrnp1P59054 583 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Snx2Q9CWK8 519 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Foxo3Q9WVH4 672 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Tcp11x2A2AEI7 503 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Oxr1Q4KMM3 866 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Dnajc3Q91YW3 504 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Abca5Q8K448 1642 aa15.03■□□□□ -0
Col5a1-201ENSMUST00000028280 Cyp26a1O55127 497 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 NppbP40753 121 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Zbtb7bQ64321 544 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 DohhA0A1Y7VJ29 135 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Hspa4lP48722 838 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 IarsQ8BU30 1262 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Myo1cQ9WTI7 1063 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Lamc2Q61092 1191 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Phactr3Q8BYK5 558 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Trim8Q99PJ2 551 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Calr3Q9D9Q6 380 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Adgrl2Q8JZZ7 1487 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Gm6370A0A0G2JGX9 315 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Gm6309L7N481 315 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Nrbp2Q91V36 499 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Nek8Q91ZR4 698 aa15.02■□□□□ -0
Col5a1-201ENSMUST00000028280 Nova2D3YVV7 556 aaKnown RBP15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Rsbn1lD3Z0K6 821 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm2237E9Q501 211 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm3591K7N6X2 186 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Mapkapk5O54992 473 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 AmphQ7TQF7 686 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 FtoQ8BGW1 502 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Zbtb18Q9WUK6 522 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Sec24cG3X972 1096 aaKnown RBP15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Pde6bP23440 856 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Alox15P39654 663 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 TrhQ62361 256 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Sh3gl2Q62420 352 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Cyp24a1Q64441 514 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 CgasQ8C6L5 507 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Abcc2Q8VI47 1543 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Kif23E9Q5G3 953 aa15.02□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ephb4P54761 987 aa15.02□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms