RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Fem1bQ9Z2G0 627 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ccdc88cQ6VGS5 2009 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ddx23D3Z0M9 819 aaKnown RBP8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Hoxa11P31311 313 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Rps6P62754 249 aaKnown RBP8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Gcnt1Q09324 428 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Bag1Q60739 355 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ift88Q61371 824 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Tbc1d30Q69ZT9 766 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ctdp1Q7TSG2 960 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Dnph1Q80VJ3 173 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Cog5Q8C0L8 829 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 NelfbQ8C4Y3 580 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Bhmt2Q91WS4 363 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Snrnp35Q9D384 244 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ltbp2O08999 1813 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Peak1Q69Z38 1735 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ripor3A1L3T7 938 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ssrp1Q08943 708 aaKnown RBP8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Carmil2Q3V3V9 1296 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Mcm7Q61881 719 aaKnown RBP8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Q66JV7 365 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Tmem132dQ76HP3 1097 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ccdc122Q8BVN0 290 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 MyripQ8K3I4 856 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Gprc5cQ8K3J9 440 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Dcaf8Q8N7N5 591 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ccdc105Q9D4K7 499 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Q9DAQ4 598 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Abcb6Q9DC29 842 aa8.38□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Gm15448F6PZL4 682 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Gucy1b3O54865 620 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 FosP01101 380 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Gjc1P28229 396 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Eps15P42567 897 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Abcd1P48410 736 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Nek1P51954 1203 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Hdgfl1Q2VPR5 283 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Znf618Q80YY7 953 aaKnown RBP8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 MslnlQ8C160 685 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Vps18Q8R307 973 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ppp2r5dQ91V89 594 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Rhobtb2Q91V93 728 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Txndc5Q91W90 417 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Vta1Q9CR26 309 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ubiad1Q9DC60 336 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 AfdnQ9QZQ1 1820 aaKnown RBP8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Acad12D3Z7X0 555 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 ErmardE9Q048 622 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Aco1P28271 889 aaKnown RBP8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Hps5P59438 1126 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Kiaa1211Q5PR69 1207 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 GypcQ78HU7 95 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Zswim4Q8C7B8 1101 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 DnerQ8JZM4 737 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Exoc1Q8R3S6 894 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ankrd1Q9CR42 319 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Krt34Q9D646 392 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 AllcQ9JHX6 414 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ifi202Q9R002 445 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Bub1bQ9Z1S0 1052 aa8.37□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Btn2a2A4QPC6 514 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Rsbn1lD3Z0K6 821 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Fgfr2P21803 821 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Kiaa1468Q148V7 1216 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Trappc10Q3TLI0 1259 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Apol10aQ8CCA5 318 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Coa7Q921H9 231 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Fam122aQ9DB52 284 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Git2Q9JLQ2 708 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Skor2A7M7C7 1008 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Arhgap4B1AUY3 965 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Cyp2b10P12791 500 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Meis2P97367 477 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Lrrfip1Q3UZ39 729 aaKnown RBP8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ccna1Q61456 421 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ccdc189Q6NZQ0 333 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Supt20hQ7TT00 530 aaKnown RBP8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Sestd1Q80UK0 696 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Snap47Q8R570 413 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Calml3Q9D6P8 149 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ifi35Q9D8C4 286 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 DohhA0A1Y7VJ29 135 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Gm4307E9PZY4 289 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Gm4312K9J7E2 289 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 EporP14753 507 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Brd9Q3UQU0 596 aaKnown RBP8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Atg4cQ811C2 458 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Bcas3Q8CCN5 928 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Q8K2W9 541 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Mov10l1Q99MV5 1187 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Rnf181Q9CY62 165 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Galnt15Q9D2N8 638 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 SisF8VQM5 1818 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ccdc88aQ5SNZ0 1873 aa8.36□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Ppef1O35655 650 aa8.35□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Prl2c3P04768 224 aa8.35□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Gng11P61953 73 aa8.35□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Sox10Q04888 466 aa8.35□□□□□ -1.07
Crnkl1-201ENSMUST00000001818 Krt9Q6RHW0 743 aa8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms