RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C MRPS35P53292 345 aa5.35□□□□□ -1.55
NUP1YOR098C DIA2Q08496 732 aaPredicted RBP5.35□□□□□ -1.55
NUP1YOR098C GIS3Q12418 502 aa5.35□□□□□ -1.55
NUP1YOR098C YDL007C-AQ2V2Q0 85 aa5.35□□□□□ -1.55
NUP1YOR098C COS5P47187 383 aa5.35□□□□□ -1.55
NUP1YOR098C RFX1P48743 811 aa5.35□□□□□ -1.55
NUP1YOR098C COP1P53622 1201 aaKnown RBP5.35□□□□□ -1.55
NUP1YOR098C REX2P54964 269 aaKnown RBP5.35□□□□□ -1.55
NUP1YOR098C YMR130WQ04223 302 aa5.35□□□□□ -1.55
NUP1YOR098C COS7Q07788 383 aa5.35□□□□□ -1.55
NUP1YOR098C DFG16Q99234 619 aa5.35□□□□□ -1.55
NUP1YOR098C SAG1P20840 650 aa5.34□□□□□ -1.55
NUP1YOR098C MCM4P30665 933 aaKnown RBP5.34□□□□□ -1.55
NUP1YOR098C EFB1P32471 206 aaKnown RBP5.34□□□□□ -1.55
NUP1YOR098C CTH1P47976 325 aa5.34□□□□□ -1.55
NUP1YOR098C YIP5P53108 310 aa5.34□□□□□ -1.55
NUP1YOR098C SNZ1Q03148 297 aa5.34□□□□□ -1.55
NUP1YOR098C RRB1Q04225 511 aaKnown RBP5.34□□□□□ -1.55
NUP1YOR098C GAS5Q08193 484 aa5.34□□□□□ -1.55
NUP1YOR098C YBR255C-AQ3E776 120 aa5.34□□□□□ -1.55
NUP1YOR098C AI1P03875 834 aa5.34□□□□□ -1.56
NUP1YOR098C CHS2P14180 963 aa5.34□□□□□ -1.56
NUP1YOR098C BOS1P25385 244 aa5.34□□□□□ -1.56
NUP1YOR098C MGM101P32787 269 aaKnown RBP5.34□□□□□ -1.56
NUP1YOR098C PEX7P39108 375 aa5.34□□□□□ -1.56
NUP1YOR098C SLU7Q02775 382 aaKnown RBP5.34□□□□□ -1.56
NUP1YOR098C ATC1Q04005 294 aa5.34□□□□□ -1.56
NUP1YOR098C KKQ8P36004 724 aa5.33□□□□□ -1.56
NUP1YOR098C NMD5P46970 1048 aa5.33□□□□□ -1.56
NUP1YOR098C TOM22P49334 152 aa5.33□□□□□ -1.56
NUP1YOR098C FHN1P53279 174 aa5.33□□□□□ -1.56
NUP1YOR098C EFM6P53970 246 aa5.33□□□□□ -1.56
NUP1YOR098C FRE5Q08908 694 aa5.33□□□□□ -1.56
NUP1YOR098C HXK2P04807 486 aaKnown RBP5.33□□□□□ -1.56
NUP1YOR098C PET18P25362 215 aa5.33□□□□□ -1.56
NUP1YOR098C GEX1P25596 615 aa5.33□□□□□ -1.56
NUP1YOR098C MSE1P48525 536 aa5.33□□□□□ -1.56
NUP1YOR098C YNL134CP53912 376 aaKnown RBP5.33□□□□□ -1.56
NUP1YOR098C YLL007CQ07799 665 aa5.33□□□□□ -1.56
NUP1YOR098C MDM20Q12387 796 aaKnown RBP5.33□□□□□ -1.56
NUP1YOR098C PDE1P22434 369 aa5.33□□□□□ -1.56
NUP1YOR098C ADH7P25377 361 aa5.33□□□□□ -1.56
NUP1YOR098C YBR144CP34215 104 aa5.33□□□□□ -1.56
NUP1YOR098C VHS2P40463 436 aa5.33□□□□□ -1.56
NUP1YOR098C CIN1P40987 1014 aa5.33□□□□□ -1.56
NUP1YOR098C MND1P53102 219 aa5.33□□□□□ -1.56
NUP1YOR098C NRG1Q03125 231 aa5.33□□□□□ -1.56
NUP1YOR098C YLR173WQ06247 608 aa5.33□□□□□ -1.56
NUP1YOR098C BCP1Q06338 283 aa5.33□□□□□ -1.56
NUP1YOR098C SEC62P21825 274 aa5.32□□□□□ -1.56
NUP1YOR098C MSS1P32559 526 aaPredicted RBP5.32□□□□□ -1.56
NUP1YOR098C BCS1P32839 456 aa5.32□□□□□ -1.56
NUP1YOR098C PTK1P36002 662 aaPredicted RBP5.32□□□□□ -1.56
NUP1YOR098C MCX1P38323 520 aaPredicted RBP5.32□□□□□ -1.56
NUP1YOR098C MNL1P38888 796 aa5.32□□□□□ -1.56
NUP1YOR098C SAP1P39955 897 aaKnown RBP5.32□□□□□ -1.56
NUP1YOR098C BUD9P53226 547 aa5.32□□□□□ -1.56
NUP1YOR098C TSR1Q07381 788 aaKnown RBP5.32□□□□□ -1.56
NUP1YOR098C TPO1Q07824 586 aa5.32□□□□□ -1.56
NUP1YOR098C YOL107WQ12239 342 aa5.32□□□□□ -1.56
NUP1YOR098C NTO1Q12311 748 aa5.32□□□□□ -1.56
NUP1YOR098C ARG81P05085 880 aa5.32□□□□□ -1.56
NUP1YOR098C RPL5P26321 297 aaKnown RBP5.32□□□□□ -1.56
NUP1YOR098C PRX1P34227 261 aaKnown RBP5.32□□□□□ -1.56
NUP1YOR098C NTR2P36118 322 aaPredicted RBP5.32□□□□□ -1.56
NUP1YOR098C TOM71P38825 639 aaKnown RBP5.32□□□□□ -1.56
NUP1YOR098C MMM1P41800 426 aa5.32□□□□□ -1.56
NUP1YOR098C URB2P47108 1174 aa5.32□□□□□ -1.56
NUP1YOR098C CAF130P53280 1122 aaPredicted RBP5.32□□□□□ -1.56
NUP1YOR098C SPC98P53540 846 aa5.32□□□□□ -1.56
NUP1YOR098C OCA2P53949 197 aa5.32□□□□□ -1.56
NUP1YOR098C SPO19Q03029 223 aa5.32□□□□□ -1.56
NUP1YOR098C DCS1Q06151 350 aa5.32□□□□□ -1.56
NUP1YOR098C CRT10Q08226 957 aa5.32□□□□□ -1.56
NUP1YOR098C YOR012WQ12351 137 aa5.32□□□□□ -1.56
NUP1YOR098C MSS116P15424 664 aaKnown RBP5.31□□□□□ -1.56
NUP1YOR098C ELM1P32801 640 aa5.31□□□□□ -1.56
NUP1YOR098C CBF5P33322 483 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
NUP1YOR098C RRP1P35178 278 aaPredicted RBP5.31□□□□□ -1.56
NUP1YOR098C PTC7P38797 343 aa5.31□□□□□ -1.56
NUP1YOR098C EMC2P47133 292 aaKnown RBP5.31□□□□□ -1.56
NUP1YOR098C DIA3P52290 468 aa5.31□□□□□ -1.56
NUP1YOR098C YMR160WQ03823 816 aa5.31□□□□□ -1.56
NUP1YOR098C CTK1Q03957 528 aaKnown RBP5.31□□□□□ -1.56
NUP1YOR098C URC2Q04411 772 aa5.31□□□□□ -1.56
NUP1YOR098C YLR455WQ06188 304 aa5.31□□□□□ -1.56
NUP1YOR098C APC1P53886 1748 aa5.31□□□□□ -1.56
NUP1YOR098C CAR1P00812 333 aaKnown RBP5.31□□□□□ -1.56
NUP1YOR098C UGA1P17649 471 aa5.31□□□□□ -1.56
NUP1YOR098C ELO2P25358 347 aa5.31□□□□□ -1.56
NUP1YOR098C YCL068CP25593 260 aa5.31□□□□□ -1.56
NUP1YOR098C MRPL7P36519 292 aa5.31□□□□□ -1.56
NUP1YOR098C SDH8P38345 138 aa5.31□□□□□ -1.56
NUP1YOR098C RPP1P38786 293 aa5.31□□□□□ -1.56
NUP1YOR098C OYE3P41816 400 aaPredicted RBP5.31□□□□□ -1.56
NUP1YOR098C TIM21P53220 239 aa5.31□□□□□ -1.56
NUP1YOR098C RTT102P53330 157 aa5.31□□□□□ -1.56
NUP1YOR098C ETT1Q08421 412 aaKnown RBP5.31□□□□□ -1.56
NUP1YOR098C SAM1P10659 382 aaKnown RBP5.31□□□□□ -1.56
NUP1YOR098C SUA5P32579 426 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 113.4 ms