RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W CHA4P43634 648 aa4.28□□□□□ -1.72
PRE9YGR135W COS5P47187 383 aa4.28□□□□□ -1.72
PRE9YGR135W RFX1P48743 811 aa4.28□□□□□ -1.72
PRE9YGR135W PAN2P53010 1115 aaPredicted RBP4.28□□□□□ -1.72
PRE9YGR135W COS12P53053 380 aa4.28□□□□□ -1.72
PRE9YGR135W NMA2P53204 395 aa4.28□□□□□ -1.72
PRE9YGR135W PGA2P53903 129 aa4.28□□□□□ -1.72
PRE9YGR135W TMA20P89886 181 aaPredicted RBP4.28□□□□□ -1.72
PRE9YGR135W PEX25Q02969 394 aa4.28□□□□□ -1.72
PRE9YGR135W ERB1Q04660 807 aaKnown RBP4.28□□□□□ -1.72
PRE9YGR135W YLR053CQ12026 108 aa4.28□□□□□ -1.72
PRE9YGR135W YOL159C-AQ3E769 90 aa4.28□□□□□ -1.72
PRE9YGR135W VCX1Q99385 411 aa4.28□□□□□ -1.72
PRE9YGR135W RAD10P06838 210 aa4.27□□□□□ -1.73
PRE9YGR135W STE12P13574 688 aa4.27□□□□□ -1.73
PRE9YGR135W CNA1P23287 553 aa4.27□□□□□ -1.73
PRE9YGR135W ICL1P28240 557 aaPredicted RBP4.27□□□□□ -1.73
PRE9YGR135W BCS1P32839 456 aa4.27□□□□□ -1.73
PRE9YGR135W UTP11P34247 250 aaPredicted RBP4.27□□□□□ -1.73
PRE9YGR135W CUE2P36075 443 aaKnown RBP4.27□□□□□ -1.73
PRE9YGR135W DUG2P38149 878 aa4.27□□□□□ -1.73
PRE9YGR135W SLM4P38247 162 aa4.27□□□□□ -1.73
PRE9YGR135W LYS9P38999 446 aa4.27□□□□□ -1.73
PRE9YGR135W YEL057CP39983 233 aa4.27□□□□□ -1.73
PRE9YGR135W SLZ1P40167 298 aa4.27□□□□□ -1.73
PRE9YGR135W RGI2P40188 164 aa4.27□□□□□ -1.73
PRE9YGR135W YTA12P40341 825 aa4.27□□□□□ -1.73
PRE9YGR135W LRO1P40345 661 aa4.27□□□□□ -1.73
PRE9YGR135W SYG1P40528 902 aa4.27□□□□□ -1.73
PRE9YGR135W ZIM17P42844 174 aa4.27□□□□□ -1.73
PRE9YGR135W YJL107CP42947 387 aa4.27□□□□□ -1.73
PRE9YGR135W CTR1P49573 406 aa4.27□□□□□ -1.73
PRE9YGR135W YGR111WP53265 400 aa4.27□□□□□ -1.73
PRE9YGR135W DCP2P53550 970 aaKnown RBP4.27□□□□□ -1.73
PRE9YGR135W LSC1P53598 329 aaKnown RBP4.27□□□□□ -1.73
PRE9YGR135W TIM11P81449 96 aaPredicted RBP4.27□□□□□ -1.73
PRE9YGR135W SLU7Q02775 382 aaKnown RBP4.27□□□□□ -1.73
PRE9YGR135W YDR476CQ03362 224 aa4.27□□□□□ -1.73
PRE9YGR135W UFO1Q04511 668 aa4.27□□□□□ -1.73
PRE9YGR135W YDR222WQ04925 415 aa4.27□□□□□ -1.73
PRE9YGR135W ARR1Q06596 294 aa4.27□□□□□ -1.73
PRE9YGR135W YPR202WQ08993 238 aa4.27□□□□□ -1.73
PRE9YGR135W SWT1Q12104 458 aa4.27□□□□□ -1.73
PRE9YGR135W PDH1Q12428 516 aaKnown RBP4.27□□□□□ -1.73
PRE9YGR135W GRX6Q12438 231 aa4.27□□□□□ -1.73
PRE9YGR135W RRD2Q12461 358 aa4.27□□□□□ -1.73
PRE9YGR135W YOR019WQ99248 730 aa4.27□□□□□ -1.73
PRE9YGR135W ILV1P00927 576 aaKnown RBP4.26□□□□□ -1.73
PRE9YGR135W SSC1P0CS90 654 aaKnown RBP4.26□□□□□ -1.73
PRE9YGR135W ATR1P13090 542 aa4.26□□□□□ -1.73
PRE9YGR135W CLB2P24869 491 aa4.26□□□□□ -1.73
PRE9YGR135W BUD23P25627 275 aaPredicted RBP4.26□□□□□ -1.73
PRE9YGR135W MGT1P26188 188 aa4.26□□□□□ -1.73
PRE9YGR135W KRE2P27809 442 aa4.26□□□□□ -1.73
PRE9YGR135W RAD14P28519 371 aa4.26□□□□□ -1.73
PRE9YGR135W CSE1P33307 960 aa4.26□□□□□ -1.73
PRE9YGR135W TIF3P34167 436 aaKnown RBP4.26□□□□□ -1.73
PRE9YGR135W AUR1P36107 401 aaPredicted RBP4.26□□□□□ -1.73
PRE9YGR135W PDX3P38075 228 aaKnown RBP4.26□□□□□ -1.73
PRE9YGR135W SMF2P38778 549 aa4.26□□□□□ -1.73
PRE9YGR135W LNP1P38878 278 aa4.26□□□□□ -1.73
PRE9YGR135W MET18P40469 1032 aa4.26□□□□□ -1.73
PRE9YGR135W SAE2P46946 345 aa4.26□□□□□ -1.73
PRE9YGR135W BNA3P47039 444 aaKnown RBP4.26□□□□□ -1.73
PRE9YGR135W VMA10P48836 114 aaKnown RBP4.26□□□□□ -1.73
PRE9YGR135W PHO23P50947 330 aa4.26□□□□□ -1.73
PRE9YGR135W SHE4P51534 789 aa4.26□□□□□ -1.73
PRE9YGR135W YGL108CP53139 140 aa4.26□□□□□ -1.73
PRE9YGR135W BIO4P53630 237 aa4.26□□□□□ -1.73
PRE9YGR135W INN1P53901 409 aa4.26□□□□□ -1.73
PRE9YGR135W KTR5P53966 522 aaPredicted RBP4.26□□□□□ -1.73
PRE9YGR135W OAZ1Q02803 292 aa4.26□□□□□ -1.73
PRE9YGR135W NGL2Q03264 515 aaKnown RBP4.26□□□□□ -1.73
PRE9YGR135W YML037CQ03703 340 aa4.26□□□□□ -1.73
PRE9YGR135W BCP1Q06338 283 aa4.26□□□□□ -1.73
PRE9YGR135W ARR3Q06598 404 aa4.26□□□□□ -1.73
PRE9YGR135W RLP24Q07915 199 aaKnown RBP4.26□□□□□ -1.73
PRE9YGR135W KEL3Q08979 651 aaPredicted RBP4.26□□□□□ -1.73
PRE9YGR135W GPM3Q12326 303 aa4.26□□□□□ -1.73
PRE9YGR135W SPE4Q12455 300 aa4.26□□□□□ -1.73
PRE9YGR135W YJR112W-AQ3E743 109 aa4.26□□□□□ -1.73
PRE9YGR135W CDC33P07260 213 aaKnown RBP4.25□□□□□ -1.73
PRE9YGR135W TUB1P09733 447 aaKnown RBP4.25□□□□□ -1.73
PRE9YGR135W VPS34P22543 875 aa4.25□□□□□ -1.73
PRE9YGR135W URK1P27515 501 aa4.25□□□□□ -1.73
PRE9YGR135W NTH1P32356 751 aa4.25□□□□□ -1.73
PRE9YGR135W MUD1P32605 298 aaKnown RBP4.25□□□□□ -1.73
PRE9YGR135W SUL1P38359 859 aa4.25□□□□□ -1.73
PRE9YGR135W YDR089WP38966 869 aa4.25□□□□□ -1.73
PRE9YGR135W NPT1P39683 429 aaKnown RBP4.25□□□□□ -1.73
PRE9YGR135W FRT2P39734 528 aa4.25□□□□□ -1.73
PRE9YGR135W ULP2P40537 1034 aaPredicted RBP4.25□□□□□ -1.73
PRE9YGR135W SNL1P40548 159 aa4.25□□□□□ -1.73
PRE9YGR135W IME4P41833 600 aa4.25□□□□□ -1.73
PRE9YGR135W FMP32P43557 207 aa4.25□□□□□ -1.73
PRE9YGR135W LAM5P43560 674 aa4.25□□□□□ -1.73
PRE9YGR135W SAD1P43589 448 aa4.25□□□□□ -1.73
PRE9YGR135W STB2P46679 850 aa4.25□□□□□ -1.73
PRE9YGR135W IMD4P50094 524 aaKnown RBP4.25□□□□□ -1.73
PRE9YGR135W YTP1P53584 459 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms