RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ARHGEF16Q5VV41 709 aa17.4■□□□□ 0.38
PHGDH-231ENST00000641939 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
PHGDH-231ENST00000641939 RAB11FIP4Q86YS3 637 aa17.4■□□□□ 0.38
PHGDH-231ENST00000641939 SRBD1Q8N5C6 995 aaKnown RBP17.4■□□□□ 0.38
PHGDH-231ENST00000641939 FANCBQ8NB91 859 aa17.4■□□□□ 0.38
PHGDH-231ENST00000641939 IWS1Q96ST2 819 aa17.4■□□□□ 0.38
PHGDH-231ENST00000641939 PRO3102Q9H379 93 aa17.4■□□□□ 0.38
PHGDH-231ENST00000641939 STARD7Q9NQZ5 370 aa17.4■□□□□ 0.38
PHGDH-231ENST00000641939 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
PHGDH-231ENST00000641939 SEC63Q9UGP8 760 aaKnown RBP17.4■□□□□ 0.38
PHGDH-231ENST00000641939 LAMA3Q16787 3333 aa17.4■□□□□ 0.38
PHGDH-231ENST00000641939 MYH7BA7E2Y1 1941 aa17.39■□□□□ 0.37
PHGDH-231ENST00000641939 PTGS1P23219 599 aa17.39■□□□□ 0.37
PHGDH-231ENST00000641939 BEX3Q00994 111 aa17.39■□□□□ 0.37
PHGDH-231ENST00000641939 FSCN1Q16658 493 aaKnown RBP17.39■□□□□ 0.37
PHGDH-231ENST00000641939 TMEM63BQ5T3F8 832 aa17.39■□□□□ 0.37
PHGDH-231ENST00000641939 APOA5Q6Q788 366 aa17.39■□□□□ 0.37
PHGDH-231ENST00000641939 SCFD2Q8WU76 684 aa17.39■□□□□ 0.37
PHGDH-231ENST00000641939 GLT1D1Q96MS3 346 aa17.39■□□□□ 0.37
PHGDH-231ENST00000641939 JAKMIP1Q96N16 626 aaKnown RBP17.39■□□□□ 0.37
PHGDH-231ENST00000641939 PXMP2Q9NR77 195 aa17.39■□□□□ 0.37
PHGDH-231ENST00000641939 PRKAG2Q9UGJ0 569 aa17.39■□□□□ 0.37
PHGDH-231ENST00000641939 ELP1O95163 1332 aa17.39■□□□□ 0.37
PHGDH-231ENST00000641939 LTBP2Q14767 1821 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-231ENST00000641939 NKRFO15226 690 aaKnown RBP eCLIP17.38■□□□□ 0.37
PHGDH-231ENST00000641939 ZEB2O60315 1214 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 EIF2AK2P19525 551 aaKnown RBP17.38■□□□□ 0.37
PHGDH-231ENST00000641939 HOXA13P31271 388 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-231ENST00000641939 FGD1P98174 961 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 PPP2R5BQ15173 497 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 STXBP2Q15833 593 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 BLOC1S2Q6QNY1 142 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 TMTC3Q6ZXV5 915 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 CMTR1Q8N1G2 835 aaKnown RBP17.38■□□□□ 0.37
PHGDH-231ENST00000641939 VTI1AQ96AJ9 217 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 GDF15Q99988 308 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 RBM28Q9NW13 759 aaKnown RBP17.38■□□□□ 0.37
PHGDH-231ENST00000641939 BRPF3Q9ULD4 1205 aa17.38■□□□□ 0.37
PHGDH-231ENST00000641939 ZBTB43O43298 467 aa17.37■□□□□ 0.37
PHGDH-231ENST00000641939 NR3C2P08235 984 aa17.37■□□□□ 0.37
PHGDH-231ENST00000641939 CPA1P15085 419 aa17.37■□□□□ 0.37
PHGDH-231ENST00000641939 PSMA5P28066 241 aa17.37■□□□□ 0.37
PHGDH-231ENST00000641939 BMP8BP34820 402 aa17.37■□□□□ 0.37
PHGDH-231ENST00000641939 MAGEA10P43363 369 aaPredicted RBP17.37■□□□□ 0.37
PHGDH-231ENST00000641939 TLE2Q04725 743 aa17.37■□□□□ 0.37
PHGDH-231ENST00000641939 TTLL4Q14679 1199 aa17.37■□□□□ 0.37
PHGDH-231ENST00000641939 CCDC82Q8N4S0 544 aa17.37■□□□□ 0.37
PHGDH-231ENST00000641939 A0A0U1RQG5 324 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-231ENST00000641939 KLF18A0A0U1RQI7 1052 aa17.36■□□□□ 0.37
PHGDH-231ENST00000641939 PQBP1O60828 265 aaKnown RBP17.36■□□□□ 0.37
PHGDH-231ENST00000641939 CABYRO75952 493 aa17.36■□□□□ 0.37
PHGDH-231ENST00000641939 TXNP10599 105 aaKnown RBP17.36■□□□□ 0.37
PHGDH-231ENST00000641939 RTN1Q16799 776 aa17.36■□□□□ 0.37
PHGDH-231ENST00000641939 CXCL17Q6UXB2 119 aa17.36■□□□□ 0.37
PHGDH-231ENST00000641939 Q6ZUG5 572 aa17.36■□□□□ 0.37
PHGDH-231ENST00000641939 ANKRD33Q7Z3H0 272 aa17.36■□□□□ 0.37
PHGDH-231ENST00000641939 OR6J1Q8NGC5 347 aa17.36■□□□□ 0.37
PHGDH-231ENST00000641939 PDCD2LQ9BRP1 358 aa17.36■□□□□ 0.37
PHGDH-231ENST00000641939 USP26Q9BXU7 913 aa17.36■□□□□ 0.37
PHGDH-231ENST00000641939 PRDM5Q9NQX1 630 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-231ENST00000641939 A0A1W2PPC1 479 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 DCDC2CA8MYV0 355 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 EIF3JO75822 258 aaKnown RBP17.35■□□□□ 0.37
PHGDH-231ENST00000641939 ARIH2O95376 493 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 RPS6KB1P23443 525 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 CPT1AP50416 773 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 RCAN1P53805 252 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 MDM2Q00987 491 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-231ENST00000641939 SEPT14Q6ZU15 432 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 TOX2Q96NM4 488 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 LBHD1Q9BQE6 289 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-231ENST00000641939 PDLIM7Q9NR12 457 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 PCDH10Q9P2E7 1040 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 MROH7Q68CQ1 1323 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 SZT2Q5T011 3432 aa17.35■□□□□ 0.37
PHGDH-231ENST00000641939 hCG_1642624A0A1W2PR95 340 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 GOLGA8AA7E2F4 631 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 GOLGA8BA8MQT2 603 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 ARVCFO00192 962 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 CLTBP09497 229 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 MYCLP12524 364 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-231ENST00000641939 CASTP20810 708 aaKnown RBP17.34■□□□□ 0.37
PHGDH-231ENST00000641939 CDK7P50613 346 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 APOBRQ0VD83 1088 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 PGM5Q15124 567 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 BRDTQ58F21 947 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-231ENST00000641939 CCDC62Q6P9F0 684 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 FCHSD1Q86WN1 690 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 FBXL16Q8N461 479 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 CNTNAP5Q8WYK1 1306 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 COPS5Q92905 334 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 POLR3EQ9NVU0 708 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 NAP1L2Q9ULW6 460 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-231ENST00000641939 SCN10AQ9Y5Y9 1956 aa17.34■□□□□ 0.37
PHGDH-231ENST00000641939 TRIM43BA6NCK2 446 aa17.33■□□□□ 0.36
PHGDH-231ENST00000641939 CCND2P30279 289 aa17.33■□□□□ 0.36
PHGDH-231ENST00000641939 LY6KQ17RY6 165 aa17.33■□□□□ 0.36
PHGDH-231ENST00000641939 SH3RF1Q7Z6J0 888 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms