RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 USP17L17D6RBQ6 530 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 USP17L19D6RCP7 530 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 USP17L20D6RJB6 530 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 KINO60870 393 aaKnown RBP14.89□□□□□ -0.03
PHGDH-221ENST00000641573 FLOT1O75955 427 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 LACTBP83111 547 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-221ENST00000641573 GRIN1Q05586 938 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 USP17L24Q0WX57 530 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 CAMK4Q16566 473 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 LETM2Q2VYF4 491 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 USP17L6PQ6QN14 398 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 LRSAM1Q6UWE0 723 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 C4orf32Q8N8J7 132 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 TNMDQ9H2S6 317 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 TMOD4Q9NZQ9 345 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 PPP1R9AQ9ULJ8 1098 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 A0A1W2PPC1 479 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 GOLGA6L3A6NEY3 463 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 MEIS2O14770 477 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 TLR2O60603 784 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 ORC2Q13416 577 aaPredicted RBP14.88□□□□□ -0.03
PHGDH-221ENST00000641573 SH3D19Q5HYK7 790 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 MCTP2Q6DN12 878 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 GAS2L3Q86XJ1 694 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 FAM43AQ8N2R8 423 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 ARHGAP39Q9C0H5 1083 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 CSRNP2Q9H175 543 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 FAM13BQ9NYF5 915 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 HPSEQ9Y251 543 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 MRPL11Q9Y3B7 192 aaKnown RBP14.88□□□□□ -0.03
PHGDH-221ENST00000641573 ABCB11O95342 1321 aa14.88□□□□□ -0.03
PHGDH-221ENST00000641573 PHIPQ8WWQ0 1821 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 FSD2A1L4K1 749 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 OPLAHO14841 1288 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 CCNT1O60563 726 aaKnown RBP14.87□□□□□ -0.03
PHGDH-221ENST00000641573 ZBED4O75132 1171 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 ICAM1P05362 532 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 AP3B2Q13367 1082 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 SPECC1Q5M775 1068 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 ARL6IP4Q66PJ3 421 aaKnown RBP14.87□□□□□ -0.03
PHGDH-221ENST00000641573 TEX2Q8IWB9 1127 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 ANO3Q9BYT9 981 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 TMEM60Q9H2L4 133 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 ZNF536O15090 1300 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 COL6A3P12111 3177 aa14.87□□□□□ -0.03
PHGDH-221ENST00000641573 VWA3AA6NCI4 1184 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 PIK3CDO00329 1044 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 LAD1O00515 517 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 CTAGE5O15320 804 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 EDIL3O43854 480 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 ZNF202O95125 648 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 FOSP01100 380 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-221ENST00000641573 FDX1P10109 184 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 CETPP11597 493 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 HOXD10P28358 340 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 SYKP43405 635 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 PPATQ06203 517 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 MTFR1Q15390 333 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 IL17AQ16552 155 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 ERO1BQ86YB8 467 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 RAET1EQ8TD07 263 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 AGBL1Q96MI9 1066 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 PRO3102Q9H379 93 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 SLC38A10Q9HBR0 1119 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 ZCCHC17Q9NP64 241 aaKnown RBP14.86□□□□□ -0.03
PHGDH-221ENST00000641573 KCNH3Q9ULD8 1083 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 CCPG1Q9ULG6 757 aa14.86□□□□□ -0.03
PHGDH-221ENST00000641573 CTDP1Q9Y5B0 961 aaPredicted RBP14.86□□□□□ -0.03
PHGDH-221ENST00000641573 SPDYE5A6NIY4 337 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 GCOM1H8Y6P7 765 aaPredicted RBP14.85□□□□□ -0.03
PHGDH-221ENST00000641573 NEMFO60524 1076 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 ECM2O94769 699 aaPredicted RBP14.85□□□□□ -0.03
PHGDH-221ENST00000641573 POLR2MP0CAP2 368 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 GRK4P32298 578 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 DSG3P32926 999 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 GJA8P48165 433 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 DTHD1Q6ZMT9 781 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 CATSPERGQ6ZRH7 1159 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 RBM43Q6ZSC3 357 aaKnown RBP14.85□□□□□ -0.03
PHGDH-221ENST00000641573 ATG4CQ96DT6 458 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 TIGD1Q96MW7 591 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 P2RX7Q99572 595 aaKnown RBP14.85□□□□□ -0.03
PHGDH-221ENST00000641573 NAP1L4Q99733 375 aaKnown RBP14.85□□□□□ -0.03
PHGDH-221ENST00000641573 TSPY26PQ9H489 355 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 RAVER2Q9HCJ3 691 aaKnown RBP14.85□□□□□ -0.03
PHGDH-221ENST00000641573 PNMA2Q9UL42 364 aa14.85□□□□□ -0.03
PHGDH-221ENST00000641573 SPDYE3A6NKU9 549 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 VWA5AO00534 786 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 CXCL11O14625 94 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 EVI5O60447 810 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 TDP2O95551 362 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 CFBP00751 764 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 GJB1P08034 283 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 OR52Z1P0C646 297 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 HOXA13P31271 388 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-221ENST00000641573 PRPHP41219 470 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 UBXN2AP68543 259 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 COG2Q14746 738 aa14.84□□□□□ -0.03
PHGDH-221ENST00000641573 USP49Q70CQ1 688 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms