RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 KIAA1468Q9P260 1216 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 DDX25Q9UHL0 483 aaKnown RBP10□□□□□ -0.81
PHGDH-219ENST00000641513 PPP1R9AQ9ULJ8 1098 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 SNCAIPQ9Y6H5 919 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 TRPM7Q96QT4 1865 aa10□□□□□ -0.81
PHGDH-219ENST00000641513 A0A087WWV3 80 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 PP2D1A8MPX8 630 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 SLC37A4O43826 429 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 ICAM1P05362 532 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 GCFC2P16383 781 aaKnown RBP9.99□□□□□ -0.81
PHGDH-219ENST00000641513 GTF2F1P35269 517 aaKnown RBP eCLIP9.99□□□□□ -0.81
PHGDH-219ENST00000641513 STAT6P42226 847 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 AFMP43652 599 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 ZNF165P49910 485 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 USP11P51784 963 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 ARHGAP4P98171 946 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 PLCB2Q00722 1185 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 ISM2Q6H9L7 571 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 GADL1Q6ZQY3 521 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.99□□□□□ -0.81
PHGDH-219ENST00000641513 MOB2Q70IA6 237 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 ARMC9Q7Z3E5 817 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 CABP7Q86V35 215 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 GRAMD1CQ8IYS0 662 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 IQUBQ8NA54 791 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 KIAA1524Q8TCG1 905 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 OTUD5Q96G74 571 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 UIMC1Q96RL1 719 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 PLIN2Q99541 437 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 PYM1Q9BRP8 204 aaKnown RBP9.99□□□□□ -0.81
PHGDH-219ENST00000641513 NAT10Q9H0A0 1025 aaKnown RBP9.99□□□□□ -0.81
PHGDH-219ENST00000641513 HOMER2Q9NSB8 354 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 AFG3L2Q9Y4W6 797 aa9.99□□□□□ -0.81
PHGDH-219ENST00000641513 ZNFX1Q9P2E3 1918 aaKnown RBP9.99□□□□□ -0.81
PHGDH-219ENST00000641513 WDR81Q562E7 1941 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 A0A087X0B3 334 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 PIK3CDO00329 1044 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 OPLAHO14841 1288 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 FOXN1O15353 648 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 ACTN4O43707 911 aaKnown RBP9.98□□□□□ -0.81
PHGDH-219ENST00000641513 CDC25AP30304 524 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 ZNF75DP51815 510 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 NLRP12P59046 1061 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 NOLC1Q14978 699 aaKnown RBP eCLIP9.98□□□□□ -0.81
PHGDH-219ENST00000641513 KARSQ15046 597 aaKnown RBP9.98□□□□□ -0.81
PHGDH-219ENST00000641513 POSTNQ15063 836 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 RRAGBQ5VZM2 374 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 PPP4R3AQ6IN85 833 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 MCF2L2Q86YR7 1114 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 ANKRD13AQ8IZ07 590 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 RBM46Q8TBY0 533 aaKnown RBP9.98□□□□□ -0.81
PHGDH-219ENST00000641513 TBC1D5Q92609 795 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 SMARCE1Q969G3 411 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 ATG4CQ96DT6 458 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 CDK5RAP3Q96JB5 506 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 C12orf42Q96LP6 360 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 RAB34Q9BZG1 259 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 SLC38A10Q9HBR0 1119 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 LRWD1Q9UFC0 647 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 CEP350Q5VT06 3117 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 DOCK5Q9H7D0 1870 aa9.98□□□□□ -0.81
PHGDH-219ENST00000641513 LOXHD1Q8IVV2 1947 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 BECN2A8MW95 431 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 POTECB2RU33 542 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 GOLGA6L19H0YKK7 550 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 SMC2O95347 1197 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 SLFN14P0C7P3 912 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 PRR29P0C7W0 189 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 FDX1P10109 184 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 SREBF1P36956 1147 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 UBXN2AP68543 259 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 PLS1Q14651 629 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 COG2Q14746 738 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 IQCB1Q15051 598 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 PRR16Q569H4 304 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 MAP1SQ66K74 1059 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-219ENST00000641513 CATSPERGQ6ZRH7 1159 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 C11orf57Q6ZUT1 292 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-219ENST00000641513 MYRIPQ8NFW9 859 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 STAMQ92783 540 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 CALML4Q96GE6 196 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 PAGE5Q96GU1 130 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 CLMNQ96JQ2 1002 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 AK8Q96MA6 479 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 P2RX7Q99572 595 aaKnown RBP9.97□□□□□ -0.81
PHGDH-219ENST00000641513 TTC12Q9H892 705 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-219ENST00000641513 RRAGCQ9HB90 399 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 KCND1Q9NSA2 647 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 PNMA2Q9UL42 364 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 ZNF536O15090 1300 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 MYH11P35749 1972 aa9.97□□□□□ -0.81
PHGDH-219ENST00000641513 A0A0G2JMZ2 1700 aa9.96□□□□□ -0.81
PHGDH-219ENST00000641513 VWA5AO00534 786 aa9.96□□□□□ -0.82
PHGDH-219ENST00000641513 NFIBO00712 420 aa9.96□□□□□ -0.82
PHGDH-219ENST00000641513 AP5Z1O43299 807 aa9.96□□□□□ -0.82
PHGDH-219ENST00000641513 EDIL3O43854 480 aa9.96□□□□□ -0.82
PHGDH-219ENST00000641513 DSG3P32926 999 aa9.96□□□□□ -0.82
PHGDH-219ENST00000641513 PPATQ06203 517 aa9.96□□□□□ -0.82
PHGDH-219ENST00000641513 MUM1L1Q5H9M0 696 aa9.96□□□□□ -0.82
PHGDH-219ENST00000641513 KRT79Q5XKE5 535 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms