RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 KRT79Q5XKE5 535 aa19.1■□□□□ 0.65
PHGDH-211ENST00000641213 SNX29Q8TEQ0 813 aa19.1■□□□□ 0.65
PHGDH-211ENST00000641213 RAD54LQ92698 747 aa19.1■□□□□ 0.65
PHGDH-211ENST00000641213 HPS3Q969F9 1004 aa19.1■□□□□ 0.65
PHGDH-211ENST00000641213 KIFC2Q96AC6 838 aa19.1■□□□□ 0.65
PHGDH-211ENST00000641213 GCFC2P16383 781 aaKnown RBP19.09■□□□□ 0.65
PHGDH-211ENST00000641213 KRT9P35527 623 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 ICA1Q05084 483 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 ERCC6LQ2NKX8 1250 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 TMEM119Q4V9L6 283 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 TMEM179Q6ZVK1 233 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 TDRD3Q9H7E2 651 aaKnown RBP19.09■□□□□ 0.65
PHGDH-211ENST00000641213 PCDHA1Q9Y5I3 950 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 A0A0U1RQJ8 604 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 PVALEFA0A1B0GWK0 134 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 USP17L15C9J2P7 530 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 USP17L13C9JLJ4 530 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 USP17L11C9JVI0 530 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 USP17L18D6R9N7 530 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 USP17L22D6RA61 530 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 USP17L17D6RBQ6 530 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 USP17L19D6RCP7 530 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 USP17L20D6RJB6 530 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 USP17L24Q0WX57 530 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 CDC37Q16543 378 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-211ENST00000641213 USP17L6PQ6QN14 398 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 CYP26C1Q6V0L0 522 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 UNC13DQ70J99 1090 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 ZNF397Q8NF99 534 aaPredicted RBP19.09■□□□□ 0.65
PHGDH-211ENST00000641213 ATRIPQ8WXE1 791 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 TUBGCP2Q9BSJ2 902 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 GLT8D2Q9H1C3 349 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 SLC39A2Q9NP94 309 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 LZTFL1Q9NQ48 299 aa19.09■□□□□ 0.65
PHGDH-211ENST00000641213 PES1O00541 588 aaKnown RBP19.08■□□□□ 0.64
PHGDH-211ENST00000641213 GDF11O95390 407 aa19.08■□□□□ 0.64
PHGDH-211ENST00000641213 DNM2P50570 870 aa19.08■□□□□ 0.64
PHGDH-211ENST00000641213 KCNK18Q7Z418 384 aa19.08■□□□□ 0.64
PHGDH-211ENST00000641213 GJA10Q969M2 543 aa19.08■□□□□ 0.64
PHGDH-211ENST00000641213 IRX2Q9BZI1 471 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-211ENST00000641213 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.64
PHGDH-211ENST00000641213 TTC26A0AVF1 554 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 PRKCSHP14314 528 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-211ENST00000641213 MAP3K9P80192 1104 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 ECM1Q16610 540 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 ABCB5Q2M3G0 1257 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 DYMQ7RTS9 669 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 FAM114A1Q8IWE2 563 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 EEF2KMTQ96G04 330 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 CNOT6LQ96LI5 555 aaKnown RBP19.07■□□□□ 0.64
PHGDH-211ENST00000641213 NAP1L4Q99733 375 aaKnown RBP19.07■□□□□ 0.64
PHGDH-211ENST00000641213 SEMA6BQ9H3T3 888 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 SMCHD1A6NHR9 2005 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 B4DLN1 442 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 F5H6K3 240 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 ENTPD3O75355 529 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 KLRC3Q07444 240 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 GLIPR1L2Q4G1C9 344 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 GMCL1P1Q8NEA9 526 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 PCDHA12Q9UN75 941 aa19.07■□□□□ 0.64
PHGDH-211ENST00000641213 YDJCA8MPS7 323 aa19.06■□□□□ 0.64
PHGDH-211ENST00000641213 MARCH6O60337 910 aa19.06■□□□□ 0.64
PHGDH-211ENST00000641213 CENPPQ6IPU0 288 aa19.06■□□□□ 0.64
PHGDH-211ENST00000641213 FBXO38Q6PIJ6 1188 aa19.06■□□□□ 0.64
PHGDH-211ENST00000641213 ACRBPQ8NEB7 543 aa19.06■□□□□ 0.64
PHGDH-211ENST00000641213 PRMT6Q96LA8 375 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-211ENST00000641213 CARD6Q9BX69 1037 aa19.06■□□□□ 0.64
PHGDH-211ENST00000641213 USP11P51784 963 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 JAG1P78504 1218 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 SLC15A2Q16348 729 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 MNS1Q8NEH6 495 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 DDX12PQ92771 950 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 DNAJC7Q99615 494 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 ANO3Q9BYT9 981 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 LRRC27Q9C0I9 530 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 CAPN11Q9UMQ6 739 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 MRFAP1Q9Y605 127 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 COL2A1P02458 1487 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-211ENST00000641213 RXRBP28702 533 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 SUPT20HQ8NEM7 779 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 OR8K1Q8NGG5 319 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 GMCL1Q96IK5 515 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 FEZ1Q99689 392 aa19.05■□□□□ 0.64
PHGDH-211ENST00000641213 LUC7L2Q9Y383 392 aaKnown RBP19.05■□□□□ 0.64
PHGDH-211ENST00000641213 MEIS2O14770 477 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 PPIP5K2O43314 1243 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 TADA3O75528 432 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 NDUFB10O96000 172 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 MTIF2P46199 727 aaKnown RBP19.04■□□□□ 0.64
PHGDH-211ENST00000641213 EHHADHQ08426 723 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 MIIPQ5JXC2 388 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 HYIQ5T013 277 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 CC2D2BQ6DHV5 1058 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 CHP1Q99653 195 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 CYP3A7-CYP3A51PA0A087WV96 503 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 KIF5CO60282 957 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 CYP3A7P24462 503 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 SNAP25P60880 206 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 TBC1D8BQ0IIM8 1120 aa19.04■□□□□ 0.64
PHGDH-211ENST00000641213 RRP1BQ14684 758 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms