RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 KCNB1Q14721 858 aa19.43■□□□□ 0.7
PHGDH-208ENST00000641023 SNX29Q8TEQ0 813 aa19.43■□□□□ 0.7
PHGDH-208ENST00000641023 ATAD5Q96QE3 1844 aa19.43■□□□□ 0.7
PHGDH-208ENST00000641023 P2RX7Q99572 595 aaKnown RBP19.43■□□□□ 0.7
PHGDH-208ENST00000641023 KCNMB3Q9NPA1 279 aa19.43■□□□□ 0.7
PHGDH-208ENST00000641023 GGA3Q9NZ52 723 aa19.43■□□□□ 0.7
PHGDH-208ENST00000641023 STK17AQ9UEE5 414 aa19.43■□□□□ 0.7
PHGDH-208ENST00000641023 ZNF112Q9UJU3 913 aa19.43■□□□□ 0.7
PHGDH-208ENST00000641023 ABCB11O95342 1321 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 PPP1R3GB7ZBB8 358 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 TBX3O15119 743 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 CDK11BP21127 795 aaKnown RBP19.42■□□□□ 0.7
PHGDH-208ENST00000641023 EPS15P42566 896 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 UBASH3AP57075 661 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 Q4G0T1 1027 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 KLHL10Q6JEL2 608 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 SCYL3Q8IZE3 742 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 CCDC47Q96A33 483 aaKnown RBP19.42■□□□□ 0.7
PHGDH-208ENST00000641023 SLF1Q9BQI6 1058 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 AS3MTQ9HBK9 375 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 CD44P16070 742 aaKnown RBP19.42■□□□□ 0.7
PHGDH-208ENST00000641023 TAL1P17542 331 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-208ENST00000641023 SV2BQ7L1I2 683 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 LDHDQ86WU2 507 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 TRMT44Q8IYL2 757 aaKnown RBP19.42■□□□□ 0.7
PHGDH-208ENST00000641023 SMYD4Q8IYR2 804 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-208ENST00000641023 WRNIP1Q96S55 665 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 PICK1Q9NRD5 415 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 IMPACTQ9P2X3 320 aa19.42■□□□□ 0.7
PHGDH-208ENST00000641023 ICAM1P05362 532 aa19.41■□□□□ 0.7
PHGDH-208ENST00000641023 CIITAP33076 1130 aa19.41■□□□□ 0.7
PHGDH-208ENST00000641023 GRB10Q13322 594 aa19.41■□□□□ 0.7
PHGDH-208ENST00000641023 PRR16Q569H4 304 aa19.41■□□□□ 0.7
PHGDH-208ENST00000641023 SPATA1Q5VX52 437 aa19.41■□□□□ 0.7
PHGDH-208ENST00000641023 LRRC15Q8TF66 581 aa19.41■□□□□ 0.7
PHGDH-208ENST00000641023 TRIM9Q9C026 710 aa19.41■□□□□ 0.7
PHGDH-208ENST00000641023 DICER1Q9UPY3 1922 aaKnown RBP19.41■□□□□ 0.7
PHGDH-208ENST00000641023 SYNRGQ9UMZ2 1314 aa19.41■□□□□ 0.7
PHGDH-208ENST00000641023 CYP3A4P08684 503 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 ZNF18P17022 549 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 FILIP1Q7Z7B0 1213 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 FCHSD1Q86WN1 690 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 LARP4BQ92615 738 aaKnown RBP19.4■□□□□ 0.7
PHGDH-208ENST00000641023 MED15Q96RN5 788 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 C7orf25Q9BPX7 421 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 SYT17Q9BSW7 474 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 WDR18Q9BV38 432 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 KCNF1Q9H3M0 494 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 EHMT1Q9H9B1 1298 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 RHOBTB3O94955 611 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 ZNF76P36508 570 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 HIRAP54198 1017 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-208ENST00000641023 MTMR2Q13614 643 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 CCDC144BQ3MJ40 725 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 SUPT20HL1Q3ZLR7 823 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 KMT5BQ4FZB7 885 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 PRAMEF18Q5VWM3 479 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 PNMA5Q96PV4 448 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 GTPBP4Q9BZE4 634 aaKnown RBP19.4■□□□□ 0.7
PHGDH-208ENST00000641023 TANGO6Q9C0B7 1094 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 LRRC27Q9C0I9 530 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 NT5C3AQ9H0P0 336 aa19.4■□□□□ 0.7
PHGDH-208ENST00000641023 KDM3AQ9Y4C1 1321 aa19.39■□□□□ 0.7
PHGDH-208ENST00000641023 GSDMDP57764 484 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 SPP2Q13103 211 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 ZKSCAN4Q969J2 545 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-208ENST00000641023 FAM20AQ96MK3 541 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 CCPG1Q9ULG6 757 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 FAM86B1E9PN63 330 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 SLC26A4O43511 780 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 KLRC4O43908 158 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 DDNO94850 711 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-208ENST00000641023 FAM86B2P0C5J1 330 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 VCAM1P19320 739 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 BACE1P56817 501 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 DHX8Q14562 1220 aaKnown RBP19.39■□□□□ 0.69
PHGDH-208ENST00000641023 ZNF280CQ8ND82 737 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 ETNPPLQ8TBG4 499 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 GJA10Q969M2 543 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 SAMSN1Q9NSI8 373 aaKnown RBP19.39■□□□□ 0.69
PHGDH-208ENST00000641023 BLOC1S4Q9NUP1 217 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 RNF181Q9P0P0 153 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 RWDD2AQ9UIY3 292 aa19.39■□□□□ 0.69
PHGDH-208ENST00000641023 PITPNM2Q9BZ72 1349 aa19.38■□□□□ 0.69
PHGDH-208ENST00000641023 FLOT1O75955 427 aa19.38■□□□□ 0.69
PHGDH-208ENST00000641023 PTPRAP18433 802 aa19.38■□□□□ 0.69
PHGDH-208ENST00000641023 STX17P56962 302 aa19.38■□□□□ 0.69
PHGDH-208ENST00000641023 PAK1Q13153 545 aa19.38■□□□□ 0.69
PHGDH-208ENST00000641023 STIM1Q13586 685 aa19.38■□□□□ 0.69
PHGDH-208ENST00000641023 TPD52L1Q16890 204 aaPredicted RBP19.38■□□□□ 0.69
PHGDH-208ENST00000641023 TBC1D5Q92609 795 aa19.38■□□□□ 0.69
PHGDH-208ENST00000641023 NUDT12Q9BQG2 462 aa19.38■□□□□ 0.69
PHGDH-208ENST00000641023 EMILIN3Q9NT22 766 aa19.38■□□□□ 0.69
PHGDH-208ENST00000641023 PNMA2Q9UL42 364 aa19.38■□□□□ 0.69
PHGDH-208ENST00000641023 ASIC1P78348 528 aa19.37■□□□□ 0.69
PHGDH-208ENST00000641023 TMEM119Q4V9L6 283 aa19.37■□□□□ 0.69
PHGDH-208ENST00000641023 LRRC8AQ8IWT6 810 aa19.37■□□□□ 0.69
PHGDH-208ENST00000641023 GIMAP8Q8ND71 665 aaPredicted RBP19.37■□□□□ 0.69
PHGDH-208ENST00000641023 RAD54LQ92698 747 aa19.37■□□□□ 0.69
PHGDH-208ENST00000641023 LENG9Q96B70 501 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms