RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 EEPD1Q7L9B9 569 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 ASCL5Q7RTU5 278 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 ERMP1Q7Z2K6 904 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 FBXO16Q8IX29 292 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-226ENST00000640916 PBXIP1Q96AQ6 731 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 PRRX2Q99811 253 aa9.77□□□□□ -0.85
SCARB2-226ENST00000640916 CRNKL1Q9BZJ0 848 aaKnown RBP9.77□□□□□ -0.85
SCARB2-226ENST00000640916 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.85
SCARB2-226ENST00000640916 A1CFQ9NQ94 594 aaKnown RBP9.77□□□□□ -0.85
SCARB2-226ENST00000640916 ASB14A6NK59 587 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 PROB1E7EW31 1015 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 MBTPS2O43462 519 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 RAD21O60216 631 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 NBNO60934 754 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 CXCL10P02778 98 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 PDE6AP16499 860 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 SLFN5Q08AF3 891 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 SLFNL1Q499Z3 407 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 DUSP28Q4G0W2 176 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 TPRNQ4KMQ1 711 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 NFRKBQ6P4R8 1299 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 RETREG2Q8NC44 543 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 BANK1Q8NDB2 785 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 MORC4Q8TE76 937 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 DHX38Q92620 1227 aaKnown RBP9.76□□□□□ -0.85
SCARB2-226ENST00000640916 PURBQ96QR8 312 aaKnown RBP9.76□□□□□ -0.85
SCARB2-226ENST00000640916 ZBED2Q9BTP6 218 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 FBXO40Q9UH90 709 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 FAM186AA6NE01 2351 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 RALGAPA2Q2PPJ7 1873 aa9.76□□□□□ -0.85
SCARB2-226ENST00000640916 RIF1Q5UIP0 2472 aaKnown RBP9.75□□□□□ -0.85
SCARB2-226ENST00000640916 ZBED4O75132 1171 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 KRT37O76014 449 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 MYL3P08590 195 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 OAZ1P54368 228 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 HTRA4P83105 476 aaPredicted RBP9.75□□□□□ -0.85
SCARB2-226ENST00000640916 BFSP2Q13515 415 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 LRRFIP1Q32MZ4 808 aaKnown RBP9.75□□□□□ -0.85
SCARB2-226ENST00000640916 CNKSR3Q6P9H4 555 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 TRAF7Q6Q0C0 670 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 KIAA1211Q6ZU35 1233 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 FBXL6Q8N531 539 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 SSH3Q8TE77 659 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 KIFC2Q96AC6 838 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 MTG1Q9BT17 334 aaPredicted RBP9.75□□□□□ -0.85
SCARB2-226ENST00000640916 ARMT1Q9H993 441 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 HOMER2Q9NSB8 354 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 POLR3EQ9NVU0 708 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 TNNQ9UQP3 1299 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 DMXL1Q9Y485 3027 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 ZNF532Q9HCE3 1301 aa9.75□□□□□ -0.85
SCARB2-226ENST00000640916 CACNA1BQ00975 2339 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 DNAH14Q0VDD8 3507 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 KMT2BQ9UMN6 2715 aaPredicted RBP9.74□□□□□ -0.85
SCARB2-226ENST00000640916 ABHD14A-ACY1A0A1B0GW23 586 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 RBM47A0AV96 593 aaKnown RBP9.74□□□□□ -0.85
SCARB2-226ENST00000640916 USP17L12C9JPN9 530 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 USP17L21D6R901 530 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 E9PSI1 815 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 H3BNC9 293 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 GNAI2P04899 355 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 ZXDAP98168 799 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 PTPN11Q06124 597 aaPredicted RBP9.74□□□□□ -0.85
SCARB2-226ENST00000640916 RBL2Q08999 1139 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 PKN1Q16512 942 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 EPC2Q52LR7 807 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 TIGD5Q53EQ6 642 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 SLC9C2Q5TAH2 1124 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 FAM117BQ6P1L5 589 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.74□□□□□ -0.85
SCARB2-226ENST00000640916 RPAINQ86UA6 219 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 TRMT2AQ8IZ69 625 aaKnown RBP9.74□□□□□ -0.85
SCARB2-226ENST00000640916 ASIC4Q96FT7 647 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 ACAD9Q9H845 621 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 VTA1Q9NP79 307 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 CLDND1Q9NY35 253 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 NYAP2Q9P242 653 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 FAM50BQ9Y247 325 aa9.74□□□□□ -0.85
SCARB2-226ENST00000640916 NOP58Q9Y2X3 529 aaKnown RBP9.74□□□□□ -0.85
SCARB2-226ENST00000640916 IGKV6D-41A0A0C4DH26 115 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 PRR23AA6NEV1 266 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 H0Y858 1186 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 CHGBP05060 677 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 AVPR2P30518 371 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 HYAL1Q12794 435 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 MBTPS1Q14703 1052 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 CLUL1Q15846 466 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 MUM1L1Q5H9M0 696 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 FAM47CQ5HY64 1035 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 GDF6Q6KF10 455 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-226ENST00000640916 CTR9Q6PD62 1173 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 EP400NLQ6ZTU2 488 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 AFAP1L1Q8TED9 768 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 ATOH1Q92858 354 aaPredicted RBP9.73□□□□□ -0.85
SCARB2-226ENST00000640916 WDR11Q9BZH6 1224 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 NSUN3Q9H649 340 aaKnown RBP9.73□□□□□ -0.85
SCARB2-226ENST00000640916 TLR9Q9NR96 1032 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 ATP8A2Q9NTI2 1148 aa9.73□□□□□ -0.85
SCARB2-226ENST00000640916 RNF146Q9NTX7 359 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms