RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 PLVAPQ9BX97 442 aa8.68□□□□□ -1.02
SCARB2-224ENST00000640880 ZNF180Q9UJW8 692 aa8.68□□□□□ -1.02
SCARB2-224ENST00000640880 RNF112Q9ULX5 631 aa8.68□□□□□ -1.02
SCARB2-224ENST00000640880 SPEF1Q9Y4P9 236 aa8.68□□□□□ -1.02
SCARB2-224ENST00000640880 TNKSO95271 1327 aa8.68□□□□□ -1.02
SCARB2-224ENST00000640880 FANCAO15360 1455 aa8.68□□□□□ -1.02
SCARB2-224ENST00000640880 ARAP3Q8WWN8 1544 aa8.68□□□□□ -1.02
SCARB2-224ENST00000640880 CDC42BPBQ9Y5S2 1711 aa8.68□□□□□ -1.02
SCARB2-224ENST00000640880 DYNC1LI2O43237 492 aaPredicted RBP8.67□□□□□ -1.02
SCARB2-224ENST00000640880 PRKD3O94806 890 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 FBXO21O94952 628 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 ALX3O95076 343 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 F2P00734 622 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 CWF19L1Q69YN2 538 aaKnown RBP8.67□□□□□ -1.02
SCARB2-224ENST00000640880 LRRC9Q6ZRR7 1453 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 ZC3H7AQ8IWR0 971 aaKnown RBP8.67□□□□□ -1.02
SCARB2-224ENST00000640880 SMC5Q8IY18 1101 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 IFNL3Q8IZI9 196 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 TMEM130Q8N3G9 435 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 TOP6BLQ8N6T0 577 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 FBLIM1Q8WUP2 373 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 CCNB3Q8WWL7 1395 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 GPR101Q96P66 508 aaPredicted RBP8.67□□□□□ -1.02
SCARB2-224ENST00000640880 SPOCK3Q9BQ16 436 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 ZFYVE21Q9BQ24 234 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 YIPF2Q9BWQ6 316 aa8.67□□□□□ -1.02
SCARB2-224ENST00000640880 MEFVO15553 781 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-224ENST00000640880 GAS7O60861 476 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 EIF3JO75822 258 aaKnown RBP8.66□□□□□ -1.02
SCARB2-224ENST00000640880 FKBP9O95302 570 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 GPR85P60893 370 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 DSG1Q02413 1049 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 NMIQ13287 307 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-224ENST00000640880 CDK5R2Q13319 367 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 MLC1Q15049 377 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 ABCB5Q2M3G0 1257 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 FAM102BQ5T8I3 360 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 CRTC3Q6UUV7 619 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 RSPO2Q6UXX9 243 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-224ENST00000640880 FKBP9P1Q75LS8 142 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 TCEAL8Q8IYN2 117 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 DTWD2Q8NBA8 298 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 SMC1BQ8NDV3 1235 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 NEDD1Q8NHV4 660 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 NPLOC4Q8TAT6 608 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 ZNF526Q8TF50 670 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-224ENST00000640880 FRS2Q8WU20 508 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 COPS5Q92905 334 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 ASCC2Q9H1I8 757 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-224ENST00000640880 ARNT2Q9HBZ2 717 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 GPRC5CQ9NQ84 441 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 KCNH3Q9ULD8 1083 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 ZKSCAN5Q9Y2L8 839 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 ST14Q9Y5Y6 855 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 BACE2Q9Y5Z0 518 aa8.66□□□□□ -1.02
SCARB2-224ENST00000640880 PLCH2O75038 1416 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 CNTNAP4Q9C0A0 1308 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 WDR64B1ANS9 1081 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 ARVCFO00192 962 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 EOMESO95936 686 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 MYL1P05976 194 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 GSNP06396 782 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 PTPN21Q16825 1174 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 ATP13A4Q4VNC1 1196 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 ACBD5Q5T8D3 534 aaPredicted RBP8.65□□□□□ -1.02
SCARB2-224ENST00000640880 EFCAB2Q5VUJ9 269 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 NXNQ6DKJ4 435 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 PPP4R4Q6NUP7 873 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 SHISA2Q6UWI4 295 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.65□□□□□ -1.02
SCARB2-224ENST00000640880 CAMKK2Q96RR4 588 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 AKTIPQ9H8T0 292 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 CABP5Q9NP86 173 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 COQ6Q9Y2Z9 468 aa8.65□□□□□ -1.02
SCARB2-224ENST00000640880 ADGRL1O94910 1474 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 NCOA2Q15596 1464 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 DHX57Q6P158 1386 aaKnown RBP8.64□□□□□ -1.03
SCARB2-224ENST00000640880 C2orf71A6NGG8 1288 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 AURKAO14965 403 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 PRPF3O43395 683 aaKnown RBP8.64□□□□□ -1.03
SCARB2-224ENST00000640880 ABLIM3O94929 683 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 SRGAP2CP0DJJ0 459 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 GLB1P16278 677 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 ZSCAN20P17040 1043 aaPredicted RBP8.64□□□□□ -1.03
SCARB2-224ENST00000640880 CTSKP43235 329 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 HLTFQ14527 1009 aaKnown RBP eCLIP8.64□□□□□ -1.03
SCARB2-224ENST00000640880 SGO2Q562F6 1265 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 WHAMMQ8TF30 809 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 JPH3Q8WXH2 748 aaPredicted RBP8.64□□□□□ -1.03
SCARB2-224ENST00000640880 Q96M66 194 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 RHOBTB2Q9BYZ6 727 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 LUC7LQ9NQ29 371 aaKnown RBP8.64□□□□□ -1.03
SCARB2-224ENST00000640880 GPR27Q9NS67 375 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 THG1LQ9NWX6 298 aaKnown RBP8.64□□□□□ -1.03
SCARB2-224ENST00000640880 TMEFF2Q9UIK5 374 aaPredicted RBP8.64□□□□□ -1.03
SCARB2-224ENST00000640880 NPFFR2Q9Y5X5 522 aa8.64□□□□□ -1.03
SCARB2-224ENST00000640880 AKNAQ7Z591 1439 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 GOLGA6CA6NDK9 693 aa8.63□□□□□ -1.03
SCARB2-224ENST00000640880 GOLGA6BA6NDN3 693 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms