RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 USP17L6PQ6QN14 398 aa30.8■■■□□ 2.52
VEGFA-231ENST00000640499 XPNPEP3Q9NQH7 507 aa30.8■■■□□ 2.52
VEGFA-231ENST00000640499 RBM47A0AV96 593 aaKnown RBP30.79■■■□□ 2.52
VEGFA-231ENST00000640499 PPFIA3O75145 1194 aa30.79■■■□□ 2.52
VEGFA-231ENST00000640499 SMPD1P17405 629 aa30.79■■■□□ 2.52
VEGFA-231ENST00000640499 EIF2AK2P19525 551 aaKnown RBP30.79■■■□□ 2.52
VEGFA-231ENST00000640499 LRRC41Q15345 812 aa30.79■■■□□ 2.52
VEGFA-231ENST00000640499 HEATR3Q7Z4Q2 680 aa30.79■■■□□ 2.52
VEGFA-231ENST00000640499 PHKBQ93100 1093 aa30.79■■■□□ 2.52
VEGFA-231ENST00000640499 GNEQ9Y223 722 aaKnown RBP30.79■■■□□ 2.52
VEGFA-231ENST00000640499 STXBP3O00186 592 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 PIK3CDO00329 1044 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 CTAGE5O15320 804 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 DUSP11O75319 330 aaKnown RBP30.78■■■□□ 2.52
VEGFA-231ENST00000640499 IFNAR1P17181 557 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 PDE4DQ08499 809 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 NECAB2Q7Z6G3 386 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 FCHSD1Q86WN1 690 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 IL31RAQ8NI17 732 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 IWS1Q96ST2 819 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 PDCD2LQ9BRP1 358 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 C22orf23Q9BZE7 217 aa30.78■■■□□ 2.52
VEGFA-231ENST00000640499 SYNRGQ9UMZ2 1314 aa30.77■■■□□ 2.52
VEGFA-231ENST00000640499 MYADML2A6NDP7 307 aa30.77■■■□□ 2.52
VEGFA-231ENST00000640499 PRPF3O43395 683 aaKnown RBP30.77■■■□□ 2.52
VEGFA-231ENST00000640499 RBM25P49756 843 aaKnown RBP30.77■■■□□ 2.52
VEGFA-231ENST00000640499 NEK4P51957 841 aa30.77■■■□□ 2.52
VEGFA-231ENST00000640499 TNFAIP2Q03169 654 aa30.77■■■□□ 2.52
VEGFA-231ENST00000640499 STK3Q13188 491 aa30.77■■■□□ 2.52
VEGFA-231ENST00000640499 PFKFB3Q16875 520 aaPredicted RBP30.77■■■□□ 2.52
VEGFA-231ENST00000640499 ARHGEF16Q5VV41 709 aa30.77■■■□□ 2.52
VEGFA-231ENST00000640499 DNM1LO00429 736 aa30.76■■■□□ 2.51
VEGFA-231ENST00000640499 NR3C2P08235 984 aa30.76■■■□□ 2.51
VEGFA-231ENST00000640499 IQSEC1Q6DN90 963 aa30.76■■■□□ 2.51
VEGFA-231ENST00000640499 ARRDC4Q8NCT1 418 aa30.76■■■□□ 2.51
VEGFA-231ENST00000640499 KLHDC9Q8NEP7 349 aa30.76■■■□□ 2.51
VEGFA-231ENST00000640499 UPF3AQ9H1J1 476 aaKnown RBP30.76■■■□□ 2.51
VEGFA-231ENST00000640499 C11orf49Q9H6J7 331 aa30.76■■■□□ 2.51
VEGFA-231ENST00000640499 PSTPIP2Q9H939 334 aa30.76■■■□□ 2.51
VEGFA-231ENST00000640499 FRMPD4Q14CM0 1322 aa30.75■■■□□ 2.51
VEGFA-231ENST00000640499 ALPK3Q96L96 1907 aa30.75■■■□□ 2.51
VEGFA-231ENST00000640499 NKX3-2P78367 333 aa30.75■■■□□ 2.51
VEGFA-231ENST00000640499 SCRN1Q12765 414 aa30.75■■■□□ 2.51
VEGFA-231ENST00000640499 PGM5Q15124 567 aa30.75■■■□□ 2.51
VEGFA-231ENST00000640499 CCSAPQ6IQ19 270 aaPredicted RBP30.75■■■□□ 2.51
VEGFA-231ENST00000640499 BARHL2Q9NY43 387 aa30.75■■■□□ 2.51
VEGFA-231ENST00000640499 PDE4DIPQ5VU43 2346 aa30.74■■■□□ 2.51
VEGFA-231ENST00000640499 ADAMTS3O15072 1205 aa30.74■■■□□ 2.51
VEGFA-231ENST00000640499 LARGE1O95461 756 aa30.74■■■□□ 2.51
VEGFA-231ENST00000640499 GJA9P57773 515 aa30.74■■■□□ 2.51
VEGFA-231ENST00000640499 VSIG10LQ86VR7 867 aa30.74■■■□□ 2.51
VEGFA-231ENST00000640499 PFKFB2O60825 505 aa30.73■■■□□ 2.51
VEGFA-231ENST00000640499 RGS20O76081 388 aa30.73■■■□□ 2.51
VEGFA-231ENST00000640499 ARIH2O95376 493 aa30.73■■■□□ 2.51
VEGFA-231ENST00000640499 SCG2P13521 617 aa30.73■■■□□ 2.51
VEGFA-231ENST00000640499 UBE2SQ16763 222 aa30.73■■■□□ 2.51
VEGFA-231ENST00000640499 ZFP91Q96JP5 570 aaPredicted RBP30.73■■■□□ 2.51
VEGFA-231ENST00000640499 RNF26Q9BY78 433 aaPredicted RBP30.73■■■□□ 2.51
VEGFA-231ENST00000640499 WDR11Q9BZH6 1224 aa30.73■■■□□ 2.51
VEGFA-231ENST00000640499 KIAA1217Q5T5P2 1943 aa30.73■■■□□ 2.51
VEGFA-231ENST00000640499 DNAH12Q6ZR08 3092 aa30.72■■■□□ 2.51
VEGFA-231ENST00000640499 B4DLN1 442 aa30.72■■■□□ 2.51
VEGFA-231ENST00000640499 DTNBO60941 627 aa30.72■■■□□ 2.51
VEGFA-231ENST00000640499 MYCNP04198 464 aaPredicted RBP30.72■■■□□ 2.51
VEGFA-231ENST00000640499 MRPL12P52815 198 aaKnown RBP30.72■■■□□ 2.51
VEGFA-231ENST00000640499 STXBP2Q15833 593 aa30.72■■■□□ 2.51
VEGFA-231ENST00000640499 ME3Q16798 604 aa30.72■■■□□ 2.51
VEGFA-231ENST00000640499 DUSP28Q4G0W2 176 aa30.72■■■□□ 2.51
VEGFA-231ENST00000640499 CCDC62Q6P9F0 684 aa30.72■■■□□ 2.51
VEGFA-231ENST00000640499 MPHOSPH6Q99547 160 aaKnown RBP30.72■■■□□ 2.51
VEGFA-231ENST00000640499 SLC26A6Q9BXS9 759 aa30.72■■■□□ 2.51
VEGFA-231ENST00000640499 EIF3JO75822 258 aaKnown RBP30.71■■■□□ 2.51
VEGFA-231ENST00000640499 NAPAP54920 295 aa30.71■■■□□ 2.51
VEGFA-231ENST00000640499 ANKRD1Q15327 319 aa30.71■■■□□ 2.51
VEGFA-231ENST00000640499 SMARCC2Q8TAQ2 1214 aa30.71■■■□□ 2.51
VEGFA-231ENST00000640499 hCG_1984214I3L0E3 225 aa30.7■■■□□ 2.51
VEGFA-231ENST00000640499 MYCLP12524 364 aaPredicted RBP30.7■■■□□ 2.51
VEGFA-231ENST00000640499 CST5P28325 142 aaPredicted RBP30.7■■■□□ 2.51
VEGFA-231ENST00000640499 MRPS9P82933 396 aaKnown RBP30.7■■■□□ 2.51
VEGFA-231ENST00000640499 PPP1R18Q6NYC8 613 aa30.7■■■□□ 2.51
VEGFA-231ENST00000640499 NOL8Q76FK4 1167 aaKnown RBP30.7■■■□□ 2.51
VEGFA-231ENST00000640499 RNF180Q86T96 592 aa30.7■■■□□ 2.51
VEGFA-231ENST00000640499 ZNF713Q8N859 430 aaPredicted RBP30.7■■■□□ 2.51
VEGFA-231ENST00000640499 COPS5Q92905 334 aa30.7■■■□□ 2.51
VEGFA-231ENST00000640499 SENP6Q9GZR1 1112 aaPredicted RBP30.7■■■□□ 2.51
VEGFA-231ENST00000640499 RIC8AQ9NPQ8 531 aa30.7■■■□□ 2.51
VEGFA-231ENST00000640499 PHF24Q9UPV7 400 aa30.7■■■□□ 2.51
VEGFA-231ENST00000640499 DYNC1LI2O43237 492 aaPredicted RBP30.69■■■□□ 2.5
VEGFA-231ENST00000640499 CTDNEP1O95476 244 aa30.69■■■□□ 2.5
VEGFA-231ENST00000640499 SEPT14Q6ZU15 432 aa30.69■■■□□ 2.5
VEGFA-231ENST00000640499 TLK2Q86UE8 772 aa30.69■■■□□ 2.5
VEGFA-231ENST00000640499 NECAB1Q8N987 351 aa30.69■■■□□ 2.5
VEGFA-231ENST00000640499 SCFD2Q8WU76 684 aa30.69■■■□□ 2.5
VEGFA-231ENST00000640499 CUL5Q93034 780 aa30.69■■■□□ 2.5
VEGFA-231ENST00000640499 SLKQ9H2G2 1235 aaPredicted RBP30.69■■■□□ 2.5
VEGFA-231ENST00000640499 Q9Y3F1 56 aa30.69■■■□□ 2.5
VEGFA-231ENST00000640499 SMCO2A6NFE2 343 aa30.68■■■□□ 2.5
VEGFA-231ENST00000640499 C6orf222P0C671 652 aaPredicted RBP30.68■■■□□ 2.5
VEGFA-231ENST00000640499 BEX3Q00994 111 aa30.68■■■□□ 2.5
VEGFA-231ENST00000640499 ST3GAL1Q11201 340 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms