RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	ZNF76	P36508	570 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	LONP1	P36776	959 aa	Known RBP	11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	PRPH	P41219	470 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	HSD17B4	P51659	736 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	RPS6	P62753	249 aa	Known RBP	11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	IRX3	P78415	501 aa	Predicted RBP	11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	MCTP2	Q6DN12	878 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	CHADL	Q6NUI6	762 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	MCF2L2	Q86YR7	1114 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	CNNM3	Q8NE01	707 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	DHX58	Q96C10	678 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	PLIN2	Q99541	437 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	RNF146	Q9NTX7	359 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	BTBD7	Q9P203	1132 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	PAPPA2	Q9BXP8	1791 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	SNAPC2	Q13487	334 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	KRBA2	Q6ZNG9	492 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	RBM43	Q6ZSC3	357 aa	Known RBP	11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	RNF214	Q8ND24	703 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	PAGR1	Q9BTK6	254 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	FUCA2	Q9BTY2	467 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	TEX13B	Q9BXU2	312 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	RBSN	Q9H1K0	784 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	TSPY26P	Q9H489	355 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	TTC12	Q9H892	705 aa	Predicted RBP	11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	AGTPBP1	Q9UPW5	1226 aa		11.84	□□□□□ -0.51
NECAP1-223	ENST00000640091	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	GCFC2	P16383	781 aa	Known RBP	11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	CYP3A7	P24462	503 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	OAZ1	P54368	228 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	FKBP1B	P68106	108 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	ORC2	Q13416	577 aa	Predicted RBP	11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	BAAT	Q14032	418 aa	Predicted RBP	11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	KARS	Q15046	597 aa	Known RBP	11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	GPAT2	Q6NUI2	795 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	SLC30A10	Q6XR72	485 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	LBX2	Q6XYB7	198 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	RNF207	Q6ZRF8	634 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	FASTKD5	Q7L8L6	764 aa	Known RBP	11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	GRAMD1C	Q8IYS0	662 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	TIGD1	Q96MW7	591 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	TAAR1	Q96RJ0	339 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	RLF	Q13129	1914 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	POTEM	A6NI47	508 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	ATP2A1	O14983	1001 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	CTAGE5	O15320	804 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	UBA7	P41226	1012 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	HERVK_113	P62684	666 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	PNOC	Q13519	176 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	LENG9	Q96B70	501 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	MS4A4A	Q96JQ5	239 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	R3HDML	Q9H3Y0	253 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	PCDHA12	Q9UN75	941 aa		11.83	□□□□□ -0.52
NECAP1-223	ENST00000640091	MYPN	Q86TC9	1320 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	MYH7B	A7E2Y1	1941 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	ACTN4	O43707	911 aa	Known RBP	11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	CYP3A4	P08684	503 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	CYP2C8	P10632	490 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	HUNK	P57058	714 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	ISM2	Q6H9L7	571 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	SASS6	Q6UVJ0	657 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	IGSF22	Q8N9C0	903 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	RASSF8	Q8NHQ8	419 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	STAM	Q92783	540 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	NAP1L4	Q99733	375 aa	Known RBP	11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	GRPEL1	Q9HAV7	217 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	TXNRD2	Q9NNW7	524 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	KCNMB3	Q9NPA1	279 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	KIAA1468	Q9P260	1216 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	LRWD1	Q9UFC0	647 aa		11.82	□□□□□ -0.52
NECAP1-223	ENST00000640091	UNCX	A6NJT0	531 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	BIN1	O00499	593 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	CCDC192	P0DO97	292 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	EIF2AK2	P19525	551 aa	Known RBP	11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	CIITA	P33076	1130 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	AFM	P43652	599 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	MDM2	Q00987	491 aa	Predicted RBP	11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	TYRO3	Q06418	890 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091		Q3C1V9	767 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091		Q4G0T1	1027 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	IL31RA	Q8NI17	732 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	UBE2Q2	Q8WVN8	375 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	MBOAT7	Q96N66	472 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	RBPJL	Q9UBG7	517 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	PNMA2	Q9UL42	364 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	PTPRF	P10586	1907 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	IGLV3-22	A0A075B6J6	115 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	CCL15-CCL14	A0A0B4J2E2	113 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	MSH4	O15457	936 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	CASP1	P29466	404 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	TXLNA	P40222	546 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	FXR2	P51116	673 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	CCL15	Q16663	113 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	TMEM266	Q2M3C6	531 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	MOXD1	Q6UVY6	613 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	ETNPPL	Q8TBG4	499 aa		11.81	□□□□□ -0.52
NECAP1-223	ENST00000640091	RMDN3	Q96TC7	470 aa		11.81	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms