RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 FGD4Q96M96 766 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 VIPAS39Q9H9C1 493 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 CHD2O14647 1828 aaKnown RBP6.24□□□□□ -1.41
SCARB2-218ENST00000639715 LRP6O75581 1613 aa6.24□□□□□ -1.41
SCARB2-218ENST00000639715 TNKSO95271 1327 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 STK36Q9NRP7 1315 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 C6orf229H3BNL8 230 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 SEMA3EO15041 775 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 GALNT17Q6IS24 598 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 ATL2Q8NHH9 583 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 EPAS1Q99814 870 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 IRX2Q9BZI1 471 aaPredicted RBP6.23□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC113Q9H0I3 377 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 TAOK3Q9H2K8 898 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 ARPP21Q9UBL0 812 aaPredicted RBP6.23□□□□□ -1.41
SCARB2-218ENST00000639715 SCOCQ9UIL1 159 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 CTNND2Q9UQB3 1225 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF711Q9Y462 761 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 ZFXP17010 805 aaPredicted RBP6.23□□□□□ -1.41
SCARB2-218ENST00000639715 KRT9P35527 623 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 KCNJ6P48051 423 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 DEUP1Q05D60 604 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 CNNM4Q6P4Q7 775 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 TSHZ1Q6ZSZ6 1077 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 STXBP4Q6ZWJ1 553 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 BZW1Q7L1Q6 419 aaKnown RBP6.23□□□□□ -1.41
SCARB2-218ENST00000639715 ATG9AQ7Z3C6 839 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 KRT25Q7Z3Z0 450 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 NANOGNBQ7Z5D8 188 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 NLRP14Q86W24 1093 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 MB21D2Q8IYB1 491 aaPredicted RBP6.23□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF473Q8WTR7 871 aaKnown RBP6.23□□□□□ -1.41
SCARB2-218ENST00000639715 CCT8L2Q96SF2 557 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 GORASP1Q9BQQ3 440 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 UBXN6Q9BZV1 441 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 VPS54Q9P1Q0 977 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 ASAP1Q9ULH1 1129 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.23□□□□□ -1.41
SCARB2-218ENST00000639715 MMP1P03956 469 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 CCT6AP40227 531 aaKnown RBP6.23□□□□□ -1.41
SCARB2-218ENST00000639715 PDIA6Q15084 440 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 PLCB4Q15147 1175 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 MUM1Q2TAK8 710 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC122Q5T0U0 273 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 C16orf87Q6PH81 154 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 FUKQ8N0W3 1084 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 HVCN1Q96D96 273 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 NGLY1Q96IV0 654 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 RPGRIP1Q96KN7 1286 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 STRBPQ96SI9 672 aaKnown RBP6.23□□□□□ -1.41
SCARB2-218ENST00000639715 SELENOOQ9BVL4 669 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 VPS16Q9H269 839 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 TMOD2Q9NZR1 351 aa6.23□□□□□ -1.41
SCARB2-218ENST00000639715 ANKRD33BA6NCL7 494 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 SMIM23A6NLE4 172 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 H7C1D1 291 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 HGSO14964 777 aaPredicted RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 GTPBP6O43824 516 aaPredicted RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 PRDM1O75626 825 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 DNAJC8O75937 253 aaPredicted RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 RFX5P48382 616 aaPredicted RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 GUCY1A3Q02108 690 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 CUL4BQ13620 913 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 SV2BQ7L1I2 683 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 TRAIPQ9BWF2 469 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 PLA2G12BQ9BX93 195 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 EHMT1Q9H9B1 1298 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 LMCD1Q9NZU5 365 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 BLOC1S6Q9UL45 172 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 HPCAL4Q9UM19 191 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 RTCBQ9Y3I0 505 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 DCCP43146 1447 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 MYL1P05976 194 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 DNA2P51530 1060 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 SEC24CP53992 1094 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 RPS8P62241 208 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 SEPT6Q14141 434 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 C1QTNF12Q5T7M4 302 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 NAA35Q5VZE5 725 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 NCAPH2Q6IBW4 605 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 VSTM4Q8IW00 320 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 GSPT2Q8IYD1 628 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 TRMT44Q8IYL2 757 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF579Q8NAF0 562 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 TRIM11Q96F44 468 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 GLT8D2Q9H1C3 349 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 MMRN2Q9H8L6 949 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 SRPRBQ9Y5M8 271 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 ZNF609O15014 1411 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 MYO5BQ9ULV0 1848 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 CHD4Q14839 1912 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 B4DLN1 442 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 USP17L12C9JPN9 530 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 USP17L21D6R901 530 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 E2F6O75461 281 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 VIMP08670 466 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 SCG2P13521 617 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 NR1D1P20393 614 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 BCAMP50895 628 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 TNIP1Q15025 636 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms