RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 FAM196BA6NMK8 535 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 USP17L10C9JJH3 530 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 IDEP14735 1019 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 ERCC3P19447 782 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 FXR2P51116 673 aaKnown RBP eCLIP11.84□□□□□ -0.51
NECAP1-216ENST00000639167 CACNB3P54284 484 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 SEMA3FQ13275 785 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 MIIPQ5JXC2 388 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 SLC27A3Q5K4L6 730 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 KCNK18Q7Z418 384 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 GPIHBP1Q8IV16 184 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 FAM114A1Q8IWE2 563 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 ZFPM1Q8IX07 1006 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 TTYH3Q9C0H2 523 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 TRPC5Q9UL62 973 aaPredicted RBP11.84□□□□□ -0.51
NECAP1-216ENST00000639167 PCDHAC2Q9Y5I4 1007 aa11.84□□□□□ -0.51
NECAP1-216ENST00000639167 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 G3V3G9 751 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 ENC1O14682 589 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 ORC2Q13416 577 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-216ENST00000639167 LRRC41Q15345 812 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 ECM1Q16610 540 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 SHROOM1Q2M3G4 852 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-216ENST00000639167 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 RAD54LQ92698 747 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 ANKZF1Q9H8Y5 726 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 ARFGAP3Q9NP61 516 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 RIC8AQ9NPQ8 531 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 KCNQ5Q9NR82 932 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 ADAMTSL1Q8N6G6 1762 aa11.83□□□□□ -0.52
NECAP1-216ENST00000639167 LTBP1Q14766 1721 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 MARCH6O60337 910 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 KRT79Q5XKE5 535 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 NCAPH2Q6IBW4 605 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 UNC13DQ70J99 1090 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 GLIS3Q8NEA6 775 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 ZBTB9Q96C00 473 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 HDAC6Q9UBN7 1215 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 STK17AQ9UEE5 414 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 SWAP70Q9UH65 585 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 DDX25Q9UHL0 483 aaKnown RBP11.82□□□□□ -0.52
NECAP1-216ENST00000639167 POLR3GO15318 223 aaPredicted RBP11.82□□□□□ -0.52
NECAP1-216ENST00000639167 RHOXF2BP0C7M4 288 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 TCP10Q12799 353 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 CCDC122Q5T0U0 273 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 CENPPQ6IPU0 288 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 APOBEC3HQ6NTF7 200 aaKnown RBP11.82□□□□□ -0.52
NECAP1-216ENST00000639167 KIAA1328Q86T90 577 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 PROM2Q8N271 834 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 DDX12PQ92771 950 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 HAS1Q92839 578 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 CUL5Q93034 780 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 PNKPQ96T60 521 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 RHOXF2Q9BQY4 288 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 RAB34Q9BZG1 259 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 HAUS4Q9H6D7 363 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 DBNDD1Q9H9R9 158 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 MYO1AQ9UBC5 1043 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 MYO6Q9UM54 1294 aa11.82□□□□□ -0.52
NECAP1-216ENST00000639167 EP400Q96L91 3159 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 CTAGE15A4D2H0 777 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 RCCD1A6NED2 376 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 HLA-DOAP06340 250 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 CTAGE8P0CG41 777 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 PPP1R2P41236 205 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 CLK2P49760 499 aaKnown RBP11.81□□□□□ -0.52
NECAP1-216ENST00000639167 ZBED6P86452 979 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 MEA1Q16626 185 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 FKBP15Q5T1M5 1219 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 TMC4Q7Z404 712 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 CTAGE6Q86UF2 777 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 CTAGE4Q8IX94 777 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 TEKT1Q969V4 418 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 NUP58Q9BVL2 599 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 NHEJ1Q9H9Q4 299 aaPredicted RBP11.81□□□□□ -0.52
NECAP1-216ENST00000639167 ZNHIT6Q9NWK9 470 aaKnown RBP11.81□□□□□ -0.52
NECAP1-216ENST00000639167 SUGT1Q9Y2Z0 365 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 LRRC37AA6NMS7 1700 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 PVALEFA0A1B0GWK0 134 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 USP17L15C9J2P7 530 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 USP17L13C9JLJ4 530 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 USP17L11C9JVI0 530 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 USP17L18D6R9N7 530 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 USP17L22D6RA61 530 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 USP17L17D6RBQ6 530 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 USP17L19D6RCP7 530 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 USP17L20D6RJB6 530 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 ZBTB5O15062 677 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 EPHB6O15197 1021 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 ATP1A1P05023 1023 aaKnown RBP11.81□□□□□ -0.52
NECAP1-216ENST00000639167 SSBP05455 408 aaKnown RBP eCLIP11.81□□□□□ -0.52
NECAP1-216ENST00000639167 CYLC1P35663 651 aaPredicted RBP11.81□□□□□ -0.52
NECAP1-216ENST00000639167 AMPD2Q01433 879 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 CYP27A1Q02318 531 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 USP17L24Q0WX57 530 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 PDIA5Q14554 519 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 LONRF2Q1L5Z9 754 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 USP17L6PQ6QN14 398 aa11.81□□□□□ -0.52
NECAP1-216ENST00000639167 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms