RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ARL8AQ96BM9 186 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 SH3GL2Q99962 352 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 MMTAG2Q9BU76 263 aaKnown RBP12.13□□□□□ -0.47
SNIP1-204ENST00000638725 NDST4Q9H3R1 872 aa12.13□□□□□ -0.47
SNIP1-204ENST00000638725 LRRC53A6NM62 1247 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 GOLGA8KD6RF30 607 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 PRLRP16471 622 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 TCP1P17987 556 aaKnown RBP12.12□□□□□ -0.47
SNIP1-204ENST00000638725 EPHB4P54760 987 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 PDE4CQ08493 712 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 TTMPQ5BVD1 217 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 RRAGAQ7L523 313 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 MICALL1Q8N3F8 863 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 AK8Q96MA6 479 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 ALS2CR12Q96Q35 445 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 STIM2Q9P246 746 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
SNIP1-204ENST00000638725 A0A087WUV0 522 aaPredicted RBP12.12□□□□□ -0.47
SNIP1-204ENST00000638725 LOC102724428A0A0B4J2F2 783 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 EIF3HO15372 352 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNIP1-204ENST00000638725 MAGEA1P43355 309 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 GNAQP50148 359 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 SIK1P57059 783 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 ICE2Q659A1 982 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 CENPPQ6IPU0 288 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 GALNT17Q6IS24 598 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 SLC44A5Q8NCS7 719 aa12.12□□□□□ -0.47
SNIP1-204ENST00000638725 BUB1O43683 1085 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 LCA5LO95447 670 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 HIBADHP31937 336 aaKnown RBP12.11□□□□□ -0.47
SNIP1-204ENST00000638725 PPP1R2P41236 205 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 SF3B3Q15393 1217 aaKnown RBP12.11□□□□□ -0.47
SNIP1-204ENST00000638725 C12orf60Q5U649 245 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 MTMR8Q96EF0 704 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 MKNK2Q9HBH9 465 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 RBM12Q9NTZ6 932 aaKnown RBP12.11□□□□□ -0.47
SNIP1-204ENST00000638725 STX8Q9UNK0 236 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 EBAG9O00559 213 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 OPA1O60313 960 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 CPP00450 1065 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 LIG3P49916 1009 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 NAPAP54920 295 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 AMPD3Q01432 767 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
SNIP1-204ENST00000638725 NONOQ15233 471 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNIP1-204ENST00000638725 C8orf74Q6P047 294 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 DYMQ7RTS9 669 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 RUBCNQ92622 972 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 MS4A14Q96JA4 679 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 RUFY1Q96T51 708 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 TLR10Q9BXR5 811 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 FAM169AQ9Y6X4 670 aa12.11□□□□□ -0.47
SNIP1-204ENST00000638725 PAFAH1B1P43034 410 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 RASSF7Q02833 373 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 MAN2A1Q16706 1144 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 EMBQ6PCB8 327 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 GBP6Q6ZN66 633 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 BICDL1Q6ZP65 573 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 DZIP1Q86YF9 867 aaKnown RBP12.1□□□□□ -0.47
SNIP1-204ENST00000638725 CERS3Q8IU89 383 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 SH2D3CQ8N5H7 860 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 CCDC155Q8N6L0 562 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 BAP1Q92560 729 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 IQCDQ96DY2 449 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 PALM3A6NDB9 673 aaPredicted RBP12.1□□□□□ -0.47
SNIP1-204ENST00000638725 MYMKA6NI61 221 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 HSF2BPO75031 334 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 SLC1A4P43007 532 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 COBLL1Q53SF7 1204 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 KLHDC7AQ5VTJ3 777 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 TMED8Q6PL24 325 aaPredicted RBP12.1□□□□□ -0.47
SNIP1-204ENST00000638725 KRT25Q7Z3Z0 450 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 NEK8Q86SG6 692 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 TXNRD3Q86VQ6 643 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 CALML4Q96GE6 196 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 ZIM3Q96PE6 472 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 TMEM47Q9BQJ4 181 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 ZMYND12Q9H0C1 365 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 POLD4Q9HCU8 107 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 BLOC1S4Q9NUP1 217 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
SNIP1-204ENST00000638725 SMCO2A6NFE2 343 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 ZSCAN5CA6NGD5 496 aaPredicted RBP12.09□□□□□ -0.47
SNIP1-204ENST00000638725 KLRF2D3W0D1 207 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 TXKP42681 527 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 DNA2P51530 1060 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 GTF2A1P52655 376 aaPredicted RBP12.09□□□□□ -0.47
SNIP1-204ENST00000638725 GRB10Q13322 594 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 PDCLQ13371 301 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 SV2BQ7L1I2 683 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 ZNF652Q9Y2D9 606 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 ESYT3A0FGR9 886 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 SHTN1A0MZ66 631 aa12.09□□□□□ -0.47
SNIP1-204ENST00000638725 PJA2O43164 708 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms