RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 M0R2N6 131 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 PTPREP23469 700 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 MCM7P33993 719 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 TOB1P50616 345 aaPredicted RBP12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 ZNF445P59923 1031 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 FKBP1BP68106 108 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 PPATQ06203 517 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 VGLL4Q14135 290 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 MAP3K11Q16584 847 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 INF2Q27J81 1249 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 USH1GQ495M9 461 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 L1TD1Q5T7N2 865 aaKnown RBP12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 PRPF38BQ5VTL8 546 aaKnown RBP12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 JAKMIP3Q5VZ66 844 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 LDHDQ86WU2 507 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 MCF2L2Q86YR7 1114 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 SHISA4Q96DD7 197 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 PGBD1Q96JS3 809 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 RAB34Q9BZG1 259 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 RPAP3Q9H6T3 665 aaPredicted RBP12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 DACT1Q9NYF0 836 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 BIN2Q9UBW5 565 aaPredicted RBP12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 RABGAP1Q9Y3P9 1069 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 MYPNQ86TC9 1320 aa12.05□□□□□ -0.48
PRAMEF13-202ENST00000638454 SSC5DA1L4H1 1573 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 CARNS1A5YM72 827 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP17L15C9J2P7 530 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP17L13C9JLJ4 530 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP17L11C9JVI0 530 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP17L18D6R9N7 530 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP17L22D6RA61 530 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP17L17D6RBQ6 530 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP17L19D6RCP7 530 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP17L20D6RJB6 530 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 C3orf80F5H4A9 247 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 GCOM1H8Y6P7 765 aaPredicted RBP12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 GPR37L1O60883 481 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 ICAM1P05362 532 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 POLR2MP0CAP2 368 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 ATP2C1P98194 919 aaPredicted RBP12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP17L24Q0WX57 530 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 PABPC4Q13310 644 aaKnown RBP eCLIP12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 ZNF174Q15697 407 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 TMEM266Q2M3C6 531 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 LETM2Q2VYF4 491 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 CCDC174Q6PII3 467 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 RASGRP4Q8TDF6 673 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 TBCKQ8TEA7 893 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 GLIS2Q9BZE0 524 aaPredicted RBP12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 PPP1R12CQ9BZL4 782 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 HOXC10Q9NYD6 342 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 MAP3K20Q9NYL2 800 aaKnown RBP12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 TMEM63CQ9P1W3 806 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 CCPG1Q9ULG6 757 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 PPP1R9AQ9ULJ8 1098 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 AFG3L2Q9Y4W6 797 aa12.04□□□□□ -0.48
PRAMEF13-202ENST00000638454 POLR2AP24928 1970 aaKnown RBP12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 PIK3CDO00329 1044 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 CXCL11O14625 94 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 MARCH6O60337 910 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 NEMFO60524 1076 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 CCNT1O60563 726 aaKnown RBP12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 PPP1R11O60927 126 aaPredicted RBP12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 DNAJB2P25686 324 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 LONP1P36776 959 aaKnown RBP12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 PRPHP41219 470 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 SYKP43405 635 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP11P51784 963 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 OAZ1P54368 228 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 HMGCS2P54868 508 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 COG2Q14746 738 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 RESP18Q5W5W9 173 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 KANK3Q6NY19 840 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 DTHD1Q6ZMT9 781 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 NUDT18Q6ZVK8 323 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 TIGD1Q96MW7 591 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 SDF4Q9BRK5 362 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 MAF1Q9H063 256 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 CLSTN2Q9H4D0 955 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 HMX1Q9NP08 348 aaPredicted RBP12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 USP25Q9UHP3 1055 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
PRAMEF13-202ENST00000638454 SYCE3A1L190 88 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 FAM205CA6NFA0 338 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 OR52Z1P0C646 297 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 CCDC192P0DO97 292 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 C7P10643 843 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 LIG1P18858 919 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 COL9A1P20849 921 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 PPIL2Q13356 520 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 TKFCQ3LXA3 575 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 EARS2Q5JPH6 523 aaKnown RBP12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 KIAA1755Q5JYT7 1200 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 AXDND1Q5T1B0 1012 aaPredicted RBP12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 MOXD1Q6UVY6 613 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 LRSAM1Q6UWE0 723 aa12.02□□□□□ -0.49
PRAMEF13-202ENST00000638454 FASTKD5Q7L8L6 764 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms