RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CHD9Q3L8U1 2897 aa9.16□□□□□ -0.94
PNKP-229ENST00000637897 SCN5AQ14524 2016 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 KIAA1217Q5T5P2 1943 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 LOC102724159A0A0B4J2E5 919 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 A6NJR5 290 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 GRXCR1A8MXD5 290 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 KLRF2D3W0D1 207 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 PARP1P09874 1014 aaKnown RBP9.15□□□□□ -0.94
PNKP-229ENST00000637897 ACRP10323 421 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 RAG1P15918 1043 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 CYP2C18P33260 490 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 NT5C2P49902 561 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 HSD17B4P51659 736 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 ITGA7Q13683 1181 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 HIC1Q14526 733 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 GPNMBQ14956 572 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 NECTIN1Q15223 517 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 PWP2Q15269 919 aaKnown RBP9.15□□□□□ -0.94
PNKP-229ENST00000637897 C8orf34Q49A92 452 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 IFIT1BQ5T764 474 aaKnown RBP9.15□□□□□ -0.94
PNKP-229ENST00000637897 MFSD5Q6N075 450 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 DNERQ8NFT8 737 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 KAT2BQ92831 832 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 GPKOWQ92917 476 aaPredicted RBP eCLIP9.15□□□□□ -0.94
PNKP-229ENST00000637897 ZFP91Q96JP5 570 aaPredicted RBP9.15□□□□□ -0.94
PNKP-229ENST00000637897 FAM161BQ96MY7 647 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 PIGSQ96S52 555 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 MYL10Q9BUA6 226 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 NOC4LQ9BVI4 516 aaKnown RBP9.15□□□□□ -0.94
PNKP-229ENST00000637897 PPP1R12CQ9BZL4 782 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 LY9Q9HBG7 655 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 TRMT13Q9NUP7 481 aaKnown RBP9.15□□□□□ -0.94
PNKP-229ENST00000637897 CXXC1Q9P0U4 656 aaPredicted RBP9.15□□□□□ -0.94
PNKP-229ENST00000637897 CHD7Q9P2D1 2997 aa9.15□□□□□ -0.94
PNKP-229ENST00000637897 ABCB11O95342 1321 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 DCDC2CA8MYV0 355 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 SLC27A2O14975 620 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 PBX2P40425 430 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 SP2Q02086 613 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 ARHGAP1Q07960 439 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 LY6KQ17RY6 165 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 CCDC178Q5BJE1 867 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 NOL8Q76FK4 1167 aaKnown RBP9.14□□□□□ -0.95
PNKP-229ENST00000637897 FBXO11Q86XK2 927 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 ESYT1Q9BSJ8 1104 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 ALDH8A1Q9H2A2 487 aaPredicted RBP9.14□□□□□ -0.95
PNKP-229ENST00000637897 SEMA6BQ9H3T3 888 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 CNNM2Q9H8M5 875 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 ADD3Q9UEY8 706 aaKnown RBP9.14□□□□□ -0.95
PNKP-229ENST00000637897 PRKAG2Q9UGJ0 569 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 STXBP5LQ9Y2K9 1186 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 U3KPZ7 1027 aaPredicted RBP9.14□□□□□ -0.95
PNKP-229ENST00000637897 MYO9BQ13459 2157 aa9.14□□□□□ -0.95
PNKP-229ENST00000637897 IFIT3O14879 490 aaKnown RBP9.13□□□□□ -0.95
PNKP-229ENST00000637897 ZBTB5O15062 677 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 CYP2C9P11712 490 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 EIF2AK2P19525 551 aaKnown RBP9.13□□□□□ -0.95
PNKP-229ENST00000637897 HOXA13P31271 388 aaPredicted RBP9.13□□□□□ -0.95
PNKP-229ENST00000637897 SMAD3P84022 425 aaKnown RBP9.13□□□□□ -0.95
PNKP-229ENST00000637897 FPGSQ05932 587 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 SEMA3FQ13275 785 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 TCTN1Q2MV58 587 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 ZNF365Q70YC5 407 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 RASEFQ8IZ41 740 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 OR6J1Q8NGC5 347 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 IPO9Q96P70 1041 aaKnown RBP9.13□□□□□ -0.95
PNKP-229ENST00000637897 RMDN3Q96TC7 470 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 CDX2Q99626 313 aaPredicted RBP9.13□□□□□ -0.95
PNKP-229ENST00000637897 PDCD2LQ9BRP1 358 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 UBAC1Q9BSL1 405 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 AP5M1Q9H0R1 490 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 PXMP2Q9NR77 195 aa9.13□□□□□ -0.95
PNKP-229ENST00000637897 DDX41Q9UJV9 622 aaKnown RBP9.13□□□□□ -0.95
PNKP-229ENST00000637897 TRIP12Q14669 1992 aaPredicted RBP9.12□□□□□ -0.95
PNKP-229ENST00000637897 SH2B2O14492 632 aaPredicted RBP9.12□□□□□ -0.95
PNKP-229ENST00000637897 CABYRO75952 493 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 PLEKHA8P1O95397 391 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 CFBP00751 764 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 NR3C2P08235 984 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 MMP3P08254 477 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 TXNP10599 105 aaKnown RBP9.12□□□□□ -0.95
PNKP-229ENST00000637897 RXRAP19793 462 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 CCL23P55773 120 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 MRPS9P82933 396 aaKnown RBP9.12□□□□□ -0.95
PNKP-229ENST00000637897 PDE4DQ08499 809 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 NBPF20Q3BBV1 942 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 ADCK5Q3MIX3 580 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 CREB3L3Q68CJ9 461 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 SEPT14Q6ZU15 432 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 VSIG10LQ86VR7 867 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 RAB11FIP4Q86YS3 637 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 CMTR1Q8N1G2 835 aaKnown RBP9.12□□□□□ -0.95
PNKP-229ENST00000637897 SRBD1Q8N5C6 995 aaKnown RBP9.12□□□□□ -0.95
PNKP-229ENST00000637897 NCOA7Q8NI08 942 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 SCFD2Q8WU76 684 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 AFG1LQ8WV93 481 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 DHX38Q92620 1227 aaKnown RBP9.12□□□□□ -0.95
PNKP-229ENST00000637897 WNT8BQ93098 351 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 VTI1AQ96AJ9 217 aa9.12□□□□□ -0.95
PNKP-229ENST00000637897 SCLYQ96I15 445 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms