RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 SPICE1Q8N0Z3 855 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 MB21D1Q8N884 522 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 NEK9Q8TD19 979 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 ADARB2Q9NS39 739 aaKnown RBP6.15□□□□□ -1.43
CHD2-227ENST00000637572 BARHL2Q9NY43 387 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 ZHX2Q9Y6X8 837 aa6.15□□□□□ -1.43
CHD2-227ENST00000637572 PTPRZ1P23471 2315 aaPredicted RBP6.15□□□□□ -1.43
CHD2-227ENST00000637572 CACNA1FO60840 1977 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 M0QZ92 97 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 PRPHP41219 470 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 PPP2R5AQ15172 486 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 ZNF827Q17R98 1081 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 MTERF4Q7Z6M4 381 aaKnown RBP6.14□□□□□ -1.43
CHD2-227ENST00000637572 CCDC84Q86UT8 332 aaPredicted RBP6.14□□□□□ -1.43
CHD2-227ENST00000637572 CMTR1Q8N1G2 835 aaKnown RBP6.14□□□□□ -1.43
CHD2-227ENST00000637572 FBXL16Q8N461 479 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 TMEM87AQ8NBN3 555 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 LINC00301Q8NCQ3 95 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 MSANTD4Q8NCY6 345 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 TBCKQ8TEA7 893 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 SPIRE2Q8WWL2 714 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 TTC12Q9H892 705 aaPredicted RBP6.14□□□□□ -1.43
CHD2-227ENST00000637572 KIAA1468Q9P260 1216 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 ZBTB21Q9ULJ3 1066 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 SRPRBQ9Y5M8 271 aaKnown RBP6.14□□□□□ -1.43
CHD2-227ENST00000637572 ANKRD62A6NC57 917 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 TRAF5O00463 557 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 GAP43P17677 238 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 TMOD1P28289 359 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 RESTQ13127 1097 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 PTPN14Q15678 1187 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 LRCH2Q5VUJ6 765 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 FAM173BQ6P4H8 233 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 KRBA2Q6ZNG9 492 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 DPP9Q86TI2 863 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 NEK11Q8NG66 645 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 FAM20AQ96MK3 541 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 RIOK1Q9BRS2 568 aaKnown RBP6.14□□□□□ -1.43
CHD2-227ENST00000637572 PLVAPQ9BX97 442 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 NUCKS1Q9H1E3 243 aaKnown RBP6.14□□□□□ -1.43
CHD2-227ENST00000637572 PCDHA7Q9UN72 937 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 NOD1Q9Y239 953 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 PCDHGA10Q9Y5H3 936 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 ALS2Q96Q42 1657 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 CACNB3P54284 484 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 KRT83P78385 493 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 PPP2R3AQ06190 1150 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 TMEM92Q6UXU6 159 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 IGDCC4Q8TDY8 1250 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 GLG1Q92896 1179 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 NACC1Q96RE7 527 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 RUFY1Q96T51 708 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 ANO3Q9BYT9 981 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 NPDC1Q9NQX5 325 aaPredicted RBP6.14□□□□□ -1.43
CHD2-227ENST00000637572 BRPF3Q9ULD4 1205 aa6.14□□□□□ -1.43
CHD2-227ENST00000637572 ZEB2O60315 1214 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 AKR1B1P15121 316 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 SERPINB4P48594 390 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 USP11P51784 963 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 PDE4CQ08493 712 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 ALCAMQ13740 583 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 ISM2Q6H9L7 571 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 TRMT1LQ7Z2T5 733 aaKnown RBP6.13□□□□□ -1.43
CHD2-227ENST00000637572 ZBTB8OSQ8IWT0 167 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 KIF18AQ8NI77 898 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 FNBP1Q96RU3 617 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 ZNF577Q9BSK1 485 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 TBC1D22BQ9NU19 505 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 AKR1B10O60218 316 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 RASA1P20936 1047 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 TECP42680 631 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 ZNF543Q08ER8 600 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 MIS18BP1Q6P0N0 1132 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 KCNV1Q6PIU1 500 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 RNF207Q6ZRF8 634 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 SND1Q7KZF4 910 aaKnown RBP eCLIP6.13□□□□□ -1.43
CHD2-227ENST00000637572 TPH2Q8IWU9 490 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 CSGALNACT2Q8N6G5 542 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 EPS8L1Q8TE68 723 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 IDI2Q9BXS1 227 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 RTFDC1Q9BY42 306 aaPredicted RBP6.13□□□□□ -1.43
CHD2-227ENST00000637572 EPB41L4AQ9HCS5 686 aaPredicted RBP6.13□□□□□ -1.43
CHD2-227ENST00000637572 SYNRGQ9UMZ2 1314 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 CCDC169A6NNP5 214 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 MCM3P25205 808 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 SLC16A2P36021 539 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 JAK3P52333 1124 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 SP4Q02446 784 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 SPP2Q13103 211 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 ANKRD13AQ8IZ07 590 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 GPC2Q8N158 579 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 MYCT1Q8N699 235 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 ZNF280CQ8ND82 737 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 NSUN6Q8TEA1 469 aaKnown RBP6.13□□□□□ -1.43
CHD2-227ENST00000637572 MAP7D2Q96T17 732 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 VCPKMTQ9H867 229 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 METTL14Q9HCE5 456 aaKnown RBP6.13□□□□□ -1.43
CHD2-227ENST00000637572 MAP3K20Q9NYL2 800 aaKnown RBP6.13□□□□□ -1.43
CHD2-227ENST00000637572 PKD2L1Q9P0L9 805 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 IMPACTQ9P2X3 320 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms