RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	PPP2R5D	Q14738	602 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	ZYX	Q15942	572 aa	Known RBP	3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	TUBB8	Q3ZCM7	444 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	CDCP2	Q5VXM1	449 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	KIAA1614	Q5VZ46	1190 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	LMBRD2	Q68DH5	695 aa	Predicted RBP	3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	OVOS1	Q6IE37	1185 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	SPOCD1	Q6ZMY3	1216 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	NEK10	Q6ZWH5	1172 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	GPR155	Q7Z3F1	870 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	FGD2	Q7Z6J4	655 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	PTRH1	Q86Y79	214 aa	Known RBP	3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	KRT78	Q8N1N4	520 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	MPND	Q8N594	471 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	CAMKK1	Q8N5S9	505 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	TMEM102	Q8N9M5	508 aa	Predicted RBP	3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	PCYOX1L	Q8NBM8	494 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	ZNF280C	Q8ND82	737 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	FAM156A	Q8NDB6	213 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	OR13H1	Q8NG92	308 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	C7orf43	Q8WVR3	580 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	TRAPPC12	Q8WVT3	735 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	KCTD13	Q8WZ19	329 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	SMARCC1	Q92922	1105 aa	Predicted RBP	3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	OSBP2	Q969R2	916 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	KIFC2	Q96AC6	838 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	HVCN1	Q96D96	273 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	ATG4C	Q96DT6	458 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	SPATA17	Q96L03	361 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	RIPOR3	Q96MK2	946 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	SPAG5	Q96R06	1193 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	BAG1	Q99933	345 aa	Predicted RBP	3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	ZKSCAN3	Q9BRR0	538 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	ANP32E	Q9BTT0	268 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	TTLL2	Q9BWV7	592 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	BHLHE41	Q9C0J9	482 aa	Predicted RBP	3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	GBP3	Q9H0R5	595 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	TRIT1	Q9H3H1	467 aa	Known RBP	3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	ZNF576	Q9H609	170 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	BRD9	Q9H8M2	597 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	ZWILCH	Q9H900	591 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	JMJD4	Q9H9V9	463 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	CERS4	Q9HA82	394 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	EMC7	Q9NPA0	242 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	PDLIM7	Q9NR12	457 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	RTEL1	Q9NZ71	1219 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	SAMD15	Q9P1V8	674 aa		3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293	MAGED2	Q9UNF1	606 aa	Predicted RBP	3.01	□□□□□ -1.93
GABRB3-223	ENST00000637293		A0A087WV62	115 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	FSD2	A1L4K1	749 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	SOWAHB	A6NEL2	793 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	SLC22A31	A6NKX4	558 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	TRIM64C	A6NLI5	447 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293		B4E171	279 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293		H3BML4	177 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	CBX4	O00257	560 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	EIF3F	O00303	357 aa	Predicted RBP	3	□□□□□ -1.93
GABRB3-223	ENST00000637293	PPEF1	O14829	653 aa	Predicted RBP	3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ADAMTS3	O15072	1205 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	HTATSF1	O43719	755 aa	Known RBP	3	□□□□□ -1.93
GABRB3-223	ENST00000637293	DTNB	O60941	627 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	CSTB	P04080	98 aa	Known RBP	3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ACR	P10323	421 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	GYS1	P13807	737 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	HOXB1	P14653	301 aa	Predicted RBP	3	□□□□□ -1.93
GABRB3-223	ENST00000637293	GLUL	P15104	373 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ATP6V1B1	P15313	513 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	RAG1	P15918	1043 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	KCNA2	P16389	499 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	RPL17	P18621	184 aa	Known RBP	3	□□□□□ -1.93
GABRB3-223	ENST00000637293	XPA	P23025	273 aa	Predicted RBP	3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ITGA6	P23229	1130 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ARNT	P27540	789 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	PEX2	P28328	305 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ADD1	P35611	737 aa	Known RBP	3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ATP6V1E1	P36543	226 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	GRM5	P41594	1212 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	COPS2	P61201	443 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	DSG1	Q02413	1049 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	CACNB2	Q08289	660 aa	Predicted RBP	3	□□□□□ -1.93
GABRB3-223	ENST00000637293	HYAL2	Q12891	473 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	GRM1	Q13255	1194 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	TRIM29	Q14134	588 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	SPARCL1	Q14515	664 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ACAP2	Q15057	778 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	CLUL1	Q15846	466 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	DDB1	Q16531	1140 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	CLEC16A	Q2KHT3	1053 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ANO4	Q32M45	955 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	NBPF9	Q3BBW0	867 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	SLC27A3	Q5K4L6	730 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	SLC10A5	Q5PT55	438 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ATAT1	Q5SQI0	421 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	HECTD3	Q5T447	861 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	IZUMO3	Q5VZ72	239 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	CCDC73	Q6ZRK6	1079 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	CCDC129	Q6ZRS4	1044 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	3	□□□□□ -1.93
GABRB3-223	ENST00000637293	ZNF227	Q86WZ6	799 aa		3	□□□□□ -1.93
GABRB3-223	ENST00000637293	MAP4K3	Q8IVH8	894 aa		3	□□□□□ -1.93

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