RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.99□□□□□ -0.65
CACNA1A-236ENST00000637117 UPF3AQ9H1J1 476 aaKnown RBP10.99□□□□□ -0.65
CACNA1A-236ENST00000637117 IL23AQ9NPF7 189 aa10.99□□□□□ -0.65
CACNA1A-236ENST00000637117 PAG1Q9NWQ8 432 aa10.99□□□□□ -0.65
CACNA1A-236ENST00000637117 CTDP1Q9Y5B0 961 aaPredicted RBP10.99□□□□□ -0.65
CACNA1A-236ENST00000637117 MAFBQ9Y5Q3 323 aaPredicted RBP10.99□□□□□ -0.65
CACNA1A-236ENST00000637117 SLC4A4Q9Y6R1 1079 aa10.99□□□□□ -0.65
CACNA1A-236ENST00000637117 MYH8P13535 1937 aa10.99□□□□□ -0.65
CACNA1A-236ENST00000637117 NCOR1O75376 2440 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 BAZ2AQ9UIF9 1905 aaKnown RBP10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 F5H6K3 240 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 CCER2I3L3R5 266 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 ATP2A1O14983 1001 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 ZBED4O75132 1171 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 DXOO77932 396 aaKnown RBP10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 CD4P01730 458 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 CCNYL3P0C7X3 344 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 COPS2P61201 443 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 KLRC3Q07444 240 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 UBE3CQ15386 1083 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 ANKRD35Q8N283 1001 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 MTIF3Q9H2K0 278 aaKnown RBP10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 NKX2-4Q9H2Z4 354 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 SLC28A3Q9HAS3 691 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 RAVER2Q9HCJ3 691 aaKnown RBP10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 CXXC1Q9P0U4 656 aaPredicted RBP10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 NYAP2Q9P242 653 aa10.98□□□□□ -0.65
CACNA1A-236ENST00000637117 CTAGE5O15320 804 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 NDUFB10O96000 172 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 CHGBP05060 677 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 NKX3-2P78367 333 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 BEX3Q00994 111 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 ARMCX2Q7L311 632 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 OTOP2Q7RTS6 562 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 STK11IPQ8N1F8 1099 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 KIFC2Q96AC6 838 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 FGD4Q96M96 766 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 SPSB2Q99619 263 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 MKNK2Q9HBH9 465 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 PRDM9Q9NQV7 894 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 FBXO40Q9UH90 709 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 USTQ9Y2C2 406 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 ZBED9Q6R2W3 1325 aa10.97□□□□□ -0.65
CACNA1A-236ENST00000637117 ATP9BO43861 1147 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 ATP5JP18859 108 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 PLA2G5P39877 138 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 TNFAIP2Q03169 654 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 CXCL17Q6UXB2 119 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 THSD4Q6ZMP0 1018 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 NOL8Q76FK4 1167 aaKnown RBP10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 CCDC144CPQ8IYA2 1237 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 FAM160A2Q8N612 972 aaPredicted RBP10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 SLC43A3Q8NBI5 491 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 CHST13Q8NET6 341 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 FAM122AQ96E09 287 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 HAUS7Q99871 368 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 KATNBL1Q9H079 304 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 PUS7LQ9H0K6 701 aaKnown RBP10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 HIPK3Q9H422 1215 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 SLC38A10Q9HBR0 1119 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 ARPP21Q9UBL0 812 aaPredicted RBP10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 FEM1BQ9UK73 627 aa10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 YBX2Q9Y2T7 364 aaKnown RBP10.96□□□□□ -0.65
CACNA1A-236ENST00000637117 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 RAB11FIP3O75154 756 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 CABYRO75952 493 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 BMP1P13497 986 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 RASA1P20936 1047 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 RABGGTBP53611 331 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 CCL23P55773 120 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 CNTN2Q02246 1040 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 ITGA7Q13683 1181 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 SBK1Q52WX2 424 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 ZSCAN25Q6NSZ9 544 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 RPAP2Q8IXW5 612 aaPredicted RBP10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 RPUSD2Q8IZ73 545 aaKnown RBP10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 PANK1Q8TE04 598 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 MKL1Q969V6 931 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 MCM3APO60318 1980 aa10.95□□□□□ -0.66
CACNA1A-236ENST00000637117 TCF20Q9UGU0 1960 aaKnown RBP10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 ASTN1O14525 1302 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 GRIN2DO15399 1336 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 UMODL1Q5DID0 1318 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 MINDY4BA8MYZ0 360 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 DYNC1LI2O43237 492 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 TLL1O43897 1013 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 ZEB2O60315 1214 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 HMMRO75330 724 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 MYOGP15173 224 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 MMP16P51512 607 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 OAZ1P54368 228 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 ZNF444Q8N0Y2 327 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 MICALL1Q8N3F8 863 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 NECAB3Q96P71 396 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 STRBPQ96SI9 672 aaKnown RBP10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 C1QTNF1Q9BXJ1 281 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 SEZ6LQ9BYH1 1024 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 AP5M1Q9H0R1 490 aa10.94□□□□□ -0.66
CACNA1A-236ENST00000637117 HOMER2Q9NSB8 354 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms