RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 DDX25Q9UHL0 483 aaKnown RBP21.12■□□□□ 0.97
CLN5-216ENST00000636780 SLC1A4P43007 532 aa21.12■□□□□ 0.97
CLN5-216ENST00000636780 KCNB1Q14721 858 aa21.12■□□□□ 0.97
CLN5-216ENST00000636780 SV2BQ7L1I2 683 aa21.12■□□□□ 0.97
CLN5-216ENST00000636780 HINFPQ9BQA5 517 aa21.12■□□□□ 0.97
CLN5-216ENST00000636780 PYM1Q9BRP8 204 aaKnown RBP21.12■□□□□ 0.97
CLN5-216ENST00000636780 PCDHA1Q9Y5I3 950 aa21.12■□□□□ 0.97
CLN5-216ENST00000636780 ARHGAP25P42331 645 aa21.11■□□□□ 0.97
CLN5-216ENST00000636780 CERKLQ49MI3 558 aaPredicted RBP21.11■□□□□ 0.97
CLN5-216ENST00000636780 CDAN1Q8IWY9 1227 aa21.11■□□□□ 0.97
CLN5-216ENST00000636780 DDX12PQ92771 950 aa21.11■□□□□ 0.97
CLN5-216ENST00000636780 MASTLQ96GX5 879 aa21.11■□□□□ 0.97
CLN5-216ENST00000636780 RNF216Q9NWF9 866 aaPredicted RBP21.11■□□□□ 0.97
CLN5-216ENST00000636780 MAGEC2Q9UBF1 373 aaPredicted RBP21.11■□□□□ 0.97
CLN5-216ENST00000636780 ANKRD31Q8N7Z5 1873 aa21.11■□□□□ 0.97
CLN5-216ENST00000636780 BRWD3Q6RI45 1802 aa21.11■□□□□ 0.97
CLN5-216ENST00000636780 LGALS16A8MUM7 142 aa21.11■□□□□ 0.97
CLN5-216ENST00000636780 LAD1O00515 517 aa21.11■□□□□ 0.97
CLN5-216ENST00000636780 HLA-DOAP06340 250 aa21.11■□□□□ 0.97
CLN5-216ENST00000636780 H2AFXP16104 143 aaPredicted RBP21.11■□□□□ 0.97
CLN5-216ENST00000636780 HOXA13P31271 388 aaPredicted RBP21.11■□□□□ 0.97
CLN5-216ENST00000636780 KIF4BQ2VIQ3 1234 aa21.11■□□□□ 0.97
CLN5-216ENST00000636780 CT47A1Q5JQC4 288 aaPredicted RBP21.11■□□□□ 0.97
CLN5-216ENST00000636780 LARP4BQ92615 738 aaKnown RBP21.11■□□□□ 0.97
CLN5-216ENST00000636780 ZHX1Q9UKY1 873 aaPredicted RBP21.11■□□□□ 0.97
CLN5-216ENST00000636780 CLRN2A0PK11 232 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 RCCD1A6NED2 376 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 MEIS1O00470 390 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 TPM1P09493 284 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 TRIM21P19474 475 aaKnown RBP21.1■□□□□ 0.97
CLN5-216ENST00000636780 ALDH1B1P30837 517 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 STIM1Q13586 685 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 CYP2W1Q8TAV3 490 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 PRMT6Q96LA8 375 aaPredicted RBP21.1■□□□□ 0.97
CLN5-216ENST00000636780 C7orf25Q9BPX7 421 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 NOC4LQ9BVI4 516 aaKnown RBP21.1■□□□□ 0.97
CLN5-216ENST00000636780 ZHX3Q9H4I2 956 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 FAM207AQ9NSI2 230 aaPredicted RBP21.1■□□□□ 0.97
CLN5-216ENST00000636780 ZBTB5O15062 677 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 NELFCDQ8IXH7 590 aa21.1■□□□□ 0.97
CLN5-216ENST00000636780 LUC7L2Q9Y383 392 aaKnown RBP21.1■□□□□ 0.97
CLN5-216ENST00000636780 SRGAP2O75044 1071 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 CCNE1P24864 410 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 MIIPQ5JXC2 388 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 SLFN13Q68D06 897 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 CCDC84Q86UT8 332 aaPredicted RBP21.09■□□□□ 0.97
CLN5-216ENST00000636780 AK8Q96MA6 479 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 TMX4Q9H1E5 349 aaPredicted RBP21.09■□□□□ 0.97
CLN5-216ENST00000636780 RIC8AQ9NPQ8 531 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 OGFRQ9NZT2 677 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 POTEB3A0JP26 581 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 FAM170AA1A519 330 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 POTECB2RU33 542 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 SPAG1Q07617 926 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 DACT2Q5SW24 774 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 POTEBQ6S5H4 581 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 CERS3Q8IU89 383 aa21.09■□□□□ 0.97
CLN5-216ENST00000636780 EPN1Q9Y6I3 576 aaPredicted RBP21.09■□□□□ 0.97
CLN5-216ENST00000636780 KIF5CO60282 957 aa21.08■□□□□ 0.97
CLN5-216ENST00000636780 PDE6BP35913 854 aa21.08■□□□□ 0.97
CLN5-216ENST00000636780 ZYXQ15942 572 aaKnown RBP21.08■□□□□ 0.97
CLN5-216ENST00000636780 NCAPH2Q6IBW4 605 aa21.08■□□□□ 0.97
CLN5-216ENST00000636780 CUL5Q93034 780 aa21.08■□□□□ 0.97
CLN5-216ENST00000636780 KIAA1024Q9UPX6 916 aa21.08■□□□□ 0.97
CLN5-216ENST00000636780 TCP10L2B9ZVM9 353 aa21.08■□□□□ 0.96
CLN5-216ENST00000636780 CYP26C1Q6V0L0 522 aa21.08■□□□□ 0.96
CLN5-216ENST00000636780 PCDHA12Q9UN75 941 aa21.08■□□□□ 0.96
CLN5-216ENST00000636780 ITIH6Q6UXX5 1313 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 ZBTB22O15209 634 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 C21orf2O43822 256 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 NDUFA10O95299 355 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 GH2P01242 217 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 ECE1P42892 770 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 UBXN2AP68543 259 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 CDC37Q16543 378 aaPredicted RBP21.07■□□□□ 0.96
CLN5-216ENST00000636780 HHIPL2Q6UWX4 724 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 SMCR8Q8TEV9 937 aaPredicted RBP21.07■□□□□ 0.96
CLN5-216ENST00000636780 TBC1D5Q92609 795 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 LACRTQ9GZZ8 138 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 ZBTB12Q9Y330 459 aaPredicted RBP21.07■□□□□ 0.96
CLN5-216ENST00000636780 A0A1W2PRG0 241 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 F5H6K3 240 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 PSMC6P62333 389 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 KLRC3Q07444 240 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 KRT79Q5XKE5 535 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 TMTC1Q8IUR5 882 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 OR8K1Q8NGG5 319 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 PARD6BQ9BYG5 372 aa21.07■□□□□ 0.96
CLN5-216ENST00000636780 SMCHD1A6NHR9 2005 aa21.06■□□□□ 0.96
CLN5-216ENST00000636780 CLK2P49760 499 aaKnown RBP21.06■□□□□ 0.96
CLN5-216ENST00000636780 HERVK_113P62684 666 aa21.06■□□□□ 0.96
CLN5-216ENST00000636780 RAD54LQ92698 747 aa21.06■□□□□ 0.96
CLN5-216ENST00000636780 THAP9Q9H5L6 903 aa21.06■□□□□ 0.96
CLN5-216ENST00000636780 FHOD1Q9Y613 1164 aa21.06■□□□□ 0.96
CLN5-216ENST00000636780 ESYT2A0FGR8 921 aa21.06■□□□□ 0.96
CLN5-216ENST00000636780 RHOXF2BP0C7M4 288 aa21.06■□□□□ 0.96
CLN5-216ENST00000636780 TMEM266Q2M3C6 531 aa21.06■□□□□ 0.96
CLN5-216ENST00000636780 PRR16Q569H4 304 aa21.06■□□□□ 0.96
CLN5-216ENST00000636780 KIAA1755Q5JYT7 1200 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms