RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 EIF2AK2P19525 551 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 EPHB4P54760 987 aa17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 TRAF1Q13077 416 aa17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 STXBP2Q15833 593 aa17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 MFSD5Q6N075 450 aa17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 SKAP1Q86WV1 359 aa17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 COPS5Q92905 334 aa17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 MTMR8Q96EF0 704 aa17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 IWS1Q96ST2 819 aa17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 LSG1Q9H089 658 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 ANO2Q9NQ90 1003 aa17.43■□□□□ 0.38
CACNA1A-230ENST00000636768 PRC1O43663 620 aa17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 PPP1R11O60927 126 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 CD4P01730 458 aa17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 TROAPQ12815 778 aa17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 PPIGQ13427 754 aaKnown RBP eCLIP17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 SEPT14Q6ZU15 432 aa17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 TMEM199Q8N511 208 aa17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 IGDCC4Q8TDY8 1250 aa17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 PIGSQ96S52 555 aa17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 MTG1Q9BT17 334 aaPredicted RBP17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 GRIN2DO15399 1336 aa17.42■□□□□ 0.38
CACNA1A-230ENST00000636768 SLC27A2O14975 620 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 ARIH2O95376 493 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 HSD17B4P51659 736 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 PURAQ00577 322 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 SLC35G1Q2M3R5 365 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 ZNF697Q5TEC3 545 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 NFXL1Q6ZNB6 911 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 CTCFLQ8NI51 663 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 TRPV6Q9H1D0 765 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 HIPK3Q9H422 1215 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 RIOX1Q9H6W3 641 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 LY9Q9HBG7 655 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 PXMP2Q9NR77 195 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 MTMR10Q9NXD2 777 aa17.41■□□□□ 0.38
CACNA1A-230ENST00000636768 OPLAHO14841 1288 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 B4GALT4O60513 344 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 DDAH1O94760 285 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 CSF2RAP15509 400 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 CYP2C18P33260 490 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 MCM5P33992 734 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 CREB3L3Q68CJ9 461 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 FAM109BQ6ICB4 259 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 ZNF654Q8IZM8 581 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 PIBF1Q8WXW3 757 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 FAM161BQ96MY7 647 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 MYL10Q9BUA6 226 aa17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 MAP3K20Q9NYL2 800 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-230ENST00000636768 PNMA6FA0A0J9YX94 578 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 CCDC69A6NI79 296 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 A6NJR5 290 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 CYTH3O43739 400 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 KPNA6O60684 536 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 EIF3JO75822 258 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 GH1P01241 217 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 NR3C2P08235 984 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 HOXA13P31271 388 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 KIF5BP33176 963 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 SMAD3P84022 425 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 GHRHRQ02643 423 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 LY6KQ17RY6 165 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 FAM47CQ5HY64 1035 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 CCDC62Q6P9F0 684 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 TMEM87BQ96K49 555 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 MTA3Q9BTC8 594 aa17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 ALDH8A1Q9H2A2 487 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-230ENST00000636768 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 SH2B2O14492 632 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 SUPT20HL2P0C7V6 817 aa17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 MYCLP12524 364 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 CHMP4BP1P59074 171 aa17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 RNF20Q5VTR2 975 aa17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 PSRC1Q6PGN9 363 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 TMTC2Q8N394 836 aa17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 SAMD3Q8N6K7 520 aa17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 MAP3K14Q99558 947 aa17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 MRVI1Q9Y6F6 885 aa17.38■□□□□ 0.37
CACNA1A-230ENST00000636768 ACRP10323 421 aa17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 CCL23P55773 120 aa17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 ARHGAP1Q07960 439 aa17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 NECTIN1Q15223 517 aa17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 NBPF20Q3BBV1 942 aa17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 FCHSD1Q86WN1 690 aa17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 AFG1LQ8WV93 481 aa17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 PDCD2LQ9BRP1 358 aa17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 NOC4LQ9BVI4 516 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 TRMT13Q9NUP7 481 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 SEC63Q9UGP8 760 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 STXBP5LQ9Y2K9 1186 aa17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 UMODL1Q5DID0 1318 aa17.37■□□□□ 0.37
CACNA1A-230ENST00000636768 CDC45O75419 566 aa17.36■□□□□ 0.37
CACNA1A-230ENST00000636768 MMP3P08254 477 aa17.36■□□□□ 0.37
CACNA1A-230ENST00000636768 GNAQP50148 359 aa17.36■□□□□ 0.37
CACNA1A-230ENST00000636768 PGM5Q15124 567 aa17.36■□□□□ 0.37
CACNA1A-230ENST00000636768 TMEM240Q5SV17 173 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms