RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 MPOP05164 745 aa6.13□□□□□ -1.43
CLN5-212ENST00000636602 HEATR6Q6AI08 1181 aaKnown RBP6.13□□□□□ -1.43
CLN5-212ENST00000636602 RNF111Q6ZNA4 994 aa6.13□□□□□ -1.43
CLN5-212ENST00000636602 PPP1R14AQ96A00 147 aa6.13□□□□□ -1.43
CLN5-212ENST00000636602 HAUS7Q99871 368 aa6.13□□□□□ -1.43
CLN5-212ENST00000636602 PLCD4Q9BRC7 762 aa6.13□□□□□ -1.43
CLN5-212ENST00000636602 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.13□□□□□ -1.43
CLN5-212ENST00000636602 USP40Q9NVE5 1235 aa6.13□□□□□ -1.43
CLN5-212ENST00000636602 SMPD4Q9NXE4 827 aa6.13□□□□□ -1.43
CLN5-212ENST00000636602 LRP2BPQ9P2M1 347 aa6.13□□□□□ -1.43
CLN5-212ENST00000636602 CD2APQ9Y5K6 639 aa6.13□□□□□ -1.43
CLN5-212ENST00000636602 ANKRD34BA5PLL1 514 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 C9IYK1 514 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 C1QTNF3-AMACRE9PGA6 284 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 EPHX1P07099 455 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 ZNF143P52747 638 aaPredicted RBP6.12□□□□□ -1.43
CLN5-212ENST00000636602 NCKAP1LP55160 1127 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 C21orf62-AS1Q17RA5 79 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 LONRF2Q1L5Z9 754 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 CLEC16AQ2KHT3 1053 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 ZC3H12BQ5HYM0 836 aaKnown RBP6.12□□□□□ -1.43
CLN5-212ENST00000636602 AXDND1Q5T1B0 1012 aaPredicted RBP6.12□□□□□ -1.43
CLN5-212ENST00000636602 WAPLQ7Z5K2 1190 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 CCDC144CPQ8IYA2 1237 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 SGSM3Q96HU1 749 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 ZNF512BQ96KM6 892 aaPredicted RBP6.12□□□□□ -1.43
CLN5-212ENST00000636602 APBA2Q99767 749 aa6.12□□□□□ -1.43
CLN5-212ENST00000636602 RAB11FIP3O75154 756 aa6.11□□□□□ -1.43
CLN5-212ENST00000636602 MASP1P48740 699 aa6.11□□□□□ -1.43
CLN5-212ENST00000636602 NT5DC1Q5TFE4 455 aa6.11□□□□□ -1.43
CLN5-212ENST00000636602 DCAF15Q66K64 600 aa6.11□□□□□ -1.43
CLN5-212ENST00000636602 ADAT2Q7Z6V5 191 aaKnown RBP6.11□□□□□ -1.43
CLN5-212ENST00000636602 USHBP1Q8N6Y0 703 aa6.11□□□□□ -1.43
CLN5-212ENST00000636602 SMARCC1Q92922 1105 aaPredicted RBP6.11□□□□□ -1.43
CLN5-212ENST00000636602 HHIPL1Q96JK4 782 aa6.11□□□□□ -1.43
CLN5-212ENST00000636602 FGD4Q96M96 766 aa6.11□□□□□ -1.43
CLN5-212ENST00000636602 CDC6Q99741 560 aa6.11□□□□□ -1.43
CLN5-212ENST00000636602 SCAND2PQ9GZW5 306 aaPredicted RBP6.11□□□□□ -1.43
CLN5-212ENST00000636602 MKRN2Q9H000 416 aaKnown RBP6.11□□□□□ -1.43
CLN5-212ENST00000636602 SUSD2Q9UGT4 822 aa6.11□□□□□ -1.43
CLN5-212ENST00000636602 PLAAQ9Y263 795 aa6.11□□□□□ -1.43
CLN5-212ENST00000636602 A0A1W2PQU0 124 aa6.1□□□□□ -1.43
CLN5-212ENST00000636602 ITGB3P05106 788 aa6.1□□□□□ -1.43
CLN5-212ENST00000636602 L1CAMP32004 1257 aa6.1□□□□□ -1.43
CLN5-212ENST00000636602 TMEM62Q0P6H9 643 aa6.1□□□□□ -1.43
CLN5-212ENST00000636602 DALRD3Q5D0E6 543 aaKnown RBP6.1□□□□□ -1.43
CLN5-212ENST00000636602 CPZQ66K79 652 aa6.1□□□□□ -1.43
CLN5-212ENST00000636602 IPO9Q96P70 1041 aaKnown RBP6.1□□□□□ -1.43
CLN5-212ENST00000636602 KLHL25Q9H0H3 589 aa6.1□□□□□ -1.43
CLN5-212ENST00000636602 GBP3Q9H0R5 595 aa6.1□□□□□ -1.43
CLN5-212ENST00000636602 TRAV20A0A0B4J274 112 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 CBFA2T2O43439 604 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 ITGAVP06756 1048 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 IGFBP6P24592 240 aaPredicted RBP6.09□□□□□ -1.43
CLN5-212ENST00000636602 RTP1P59025 263 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 HSP90AA2PQ14568 343 aaPredicted RBP6.09□□□□□ -1.43
CLN5-212ENST00000636602 RAB3GAP1Q15042 981 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 FOXB2Q5VYV0 432 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 KREMEN1Q96MU8 473 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 MRIQ9BWK5 157 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 ASPNQ9BXN1 380 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 KRTAP3-1Q9BYR8 98 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 ARHGEF4Q9NR80 690 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 APEX2Q9UBZ4 518 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 SUGT1Q9Y2Z0 365 aa6.09□□□□□ -1.43
CLN5-212ENST00000636602 IRS2Q9Y4H2 1338 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 CCDC163A0A0D9SF12 145 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 TMEM82A0PJX8 343 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 PPM1BO75688 479 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 LIMS1P48059 325 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 PPP2R2AP63151 447 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 RNF4P78317 190 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 AMPD3Q01432 767 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 CBX2Q14781 532 aaPredicted RBP6.08□□□□□ -1.44
CLN5-212ENST00000636602 VWA3BQ502W6 1294 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 FAM209AQ5JX71 171 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 NBPF12Q5TAG4 269 aaPredicted RBP6.08□□□□□ -1.44
CLN5-212ENST00000636602 YOD1Q5VVQ6 348 aaPredicted RBP6.08□□□□□ -1.44
CLN5-212ENST00000636602 LIPIQ6XZB0 460 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 ZNF227Q86WZ6 799 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 DHX37Q8IY37 1157 aaKnown RBP6.08□□□□□ -1.44
CLN5-212ENST00000636602 NIM1KQ8IY84 436 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 ADGRG2Q8IZP9 1017 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 ENOX1Q8TC92 643 aaKnown RBP6.08□□□□□ -1.44
CLN5-212ENST00000636602 EXOC2Q96KP1 924 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 SPATA25Q9BR10 227 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 AARSD1Q9BTE6 412 aaKnown RBP6.08□□□□□ -1.44
CLN5-212ENST00000636602 LGR4Q9BXB1 951 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 FOXP3Q9BZS1 431 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 MRPS23Q9Y3D9 190 aaKnown RBP6.08□□□□□ -1.44
CLN5-212ENST00000636602 ZNF451Q9Y4E5 1061 aa6.08□□□□□ -1.44
CLN5-212ENST00000636602 TRBV23-1A0A0A0MS06 115 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 SLPIP03973 132 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 CNGA1P29973 690 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 ARL4AP40617 200 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 PABPC4Q13310 644 aaKnown RBP eCLIP6.07□□□□□ -1.44
CLN5-212ENST00000636602 AUHQ13825 339 aaKnown RBP6.07□□□□□ -1.44
CLN5-212ENST00000636602 KIR3DS1Q14943 382 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 C7orf61Q8IZ16 206 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 ADCY4Q8NFM4 1077 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms