RNA–Protein interactions for RNA: ENST00000636044.1

CHRNA7-209, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-209ENST00000636044 ARHGEF16Q5VV41 709 aa23.82■■□□□ 1.4
CHRNA7-209ENST00000636044 CMTR1Q8N1G2 835 aaKnown RBP23.82■■□□□ 1.4
CHRNA7-209ENST00000636044 SRBD1Q8N5C6 995 aaKnown RBP23.82■■□□□ 1.4
CHRNA7-209ENST00000636044 FANCBQ8NB91 859 aa23.82■■□□□ 1.4
CHRNA7-209ENST00000636044 WDR11Q9BZH6 1224 aa23.82■■□□□ 1.4
CHRNA7-209ENST00000636044 MAP3K20Q9NYL2 800 aaKnown RBP23.82■■□□□ 1.4
CHRNA7-209ENST00000636044 MYH7BA7E2Y1 1941 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 RBM47A0AV96 593 aaKnown RBP23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 DYNC1LI2O43237 492 aaPredicted RBP23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 ASGR1P07306 291 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 CPA1P15085 419 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 EIF2AK2P19525 551 aaKnown RBP23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 HOXA13P31271 388 aaPredicted RBP23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 FGD1P98174 961 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 PPP2R5BQ15173 497 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 FSCN1Q16658 493 aaKnown RBP23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 DUSP28Q4G0W2 176 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 TMTC3Q6ZXV5 915 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 GLT1D1Q96MS3 346 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 IWS1Q96ST2 819 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 PXMP2Q9NR77 195 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 BRPF3Q9ULD4 1205 aa23.81■■□□□ 1.4
CHRNA7-209ENST00000636044 EPB41L2O43491 1005 aaKnown RBP23.8■■□□□ 1.4
CHRNA7-209ENST00000636044 BLOC1S2Q6QNY1 142 aa23.8■■□□□ 1.4
CHRNA7-209ENST00000636044 SAMD3Q8N6K7 520 aa23.8■■□□□ 1.4
CHRNA7-209ENST00000636044 SCFD2Q8WU76 684 aa23.8■■□□□ 1.4
CHRNA7-209ENST00000636044 PRO3102Q9H379 93 aa23.8■■□□□ 1.4
CHRNA7-209ENST00000636044 PCDH10Q9P2E7 1040 aa23.8■■□□□ 1.4
CHRNA7-209ENST00000636044 RBM27Q9P2N5 1060 aaKnown RBP23.8■■□□□ 1.4
CHRNA7-209ENST00000636044 Q9Y3F1 56 aa23.8■■□□□ 1.4
CHRNA7-209ENST00000636044 KLF18A0A0U1RQI7 1052 aa23.79■■□□□ 1.4
CHRNA7-209ENST00000636044 GCOM1H8Y6P7 765 aaPredicted RBP23.79■■□□□ 1.4
CHRNA7-209ENST00000636044 ZBTB43O43298 467 aa23.79■■□□□ 1.4
CHRNA7-209ENST00000636044 POLR2MP0CAP2 368 aa23.79■■□□□ 1.4
CHRNA7-209ENST00000636044 RTN1Q16799 776 aa23.79■■□□□ 1.4
CHRNA7-209ENST00000636044 PRDM5Q9NQX1 630 aaPredicted RBP23.79■■□□□ 1.4
CHRNA7-209ENST00000636044 RBM28Q9NW13 759 aaKnown RBP23.79■■□□□ 1.4
CHRNA7-209ENST00000636044 PRKAG2Q9UGJ0 569 aa23.79■■□□□ 1.4
CHRNA7-209ENST00000636044 PQBP1O60828 265 aaKnown RBP23.78■■□□□ 1.4
CHRNA7-209ENST00000636044 MAGEA10P43363 369 aaPredicted RBP23.78■■□□□ 1.4
CHRNA7-209ENST00000636044 TLE2Q04725 743 aa23.78■■□□□ 1.4
CHRNA7-209ENST00000636044 STXBP2Q15833 593 aa23.78■■□□□ 1.4
CHRNA7-209ENST00000636044 CCDC82Q8N4S0 544 aa23.78■■□□□ 1.4
CHRNA7-209ENST00000636044 GDF15Q99988 308 aa23.78■■□□□ 1.4
CHRNA7-209ENST00000636044 ELP1O95163 1332 aa23.78■■□□□ 1.4
CHRNA7-209ENST00000636044 GOLGA8AA7E2F4 631 aa23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 GOLGA8BA8MQT2 603 aa23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 NKRFO15226 690 aaKnown RBP eCLIP23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 ZEB2O60315 1214 aa23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 CASTP20810 708 aaKnown RBP23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 TTLL4Q14679 1199 aa23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 FCHSD1Q86WN1 690 aa23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 OR6J1Q8NGC5 347 aa23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 VTI1AQ96AJ9 217 aa23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 PDLIM7Q9NR12 457 aa23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 NAP1L2Q9ULW6 460 aaPredicted RBP23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 CNTNAP5Q8WYK1 1306 aa23.77■■□□□ 1.4
CHRNA7-209ENST00000636044 hCG_1642624A0A1W2PR95 340 aa23.76■■□□□ 1.39
CHRNA7-209ENST00000636044 NR3C2P08235 984 aa23.76■■□□□ 1.39
CHRNA7-209ENST00000636044 TXNP10599 105 aaKnown RBP23.76■■□□□ 1.39
CHRNA7-209ENST00000636044 RPS6KB1P23443 525 aa23.76■■□□□ 1.39
CHRNA7-209ENST00000636044 PSMA5P28066 241 aa23.76■■□□□ 1.39
CHRNA7-209ENST00000636044 CXCL17Q6UXB2 119 aa23.76■■□□□ 1.39
CHRNA7-209ENST00000636044 SEPT14Q6ZU15 432 aa23.76■■□□□ 1.39
CHRNA7-209ENST00000636044 Q6ZUG5 572 aa23.76■■□□□ 1.39
CHRNA7-209ENST00000636044 PDCD2LQ9BRP1 358 aa23.76■■□□□ 1.39
CHRNA7-209ENST00000636044 SCN10AQ9Y5Y9 1956 aa23.76■■□□□ 1.39
CHRNA7-209ENST00000636044 A0A0U1RQG5 324 aaPredicted RBP23.75■■□□□ 1.39
CHRNA7-209ENST00000636044 ARIH2O95376 493 aa23.75■■□□□ 1.39
CHRNA7-209ENST00000636044 CPT1AP50416 773 aa23.75■■□□□ 1.39
CHRNA7-209ENST00000636044 RCAN1P53805 252 aa23.75■■□□□ 1.39
CHRNA7-209ENST00000636044 BRF1Q92994 677 aa23.75■■□□□ 1.39
CHRNA7-209ENST00000636044 USP26Q9BXU7 913 aa23.75■■□□□ 1.39
CHRNA7-209ENST00000636044 EIF3JO75822 258 aaKnown RBP23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 CABYRO75952 493 aa23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 CLTBP09497 229 aa23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 MYCLP12524 364 aaPredicted RBP23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 MDM2Q00987 491 aaPredicted RBP23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 APOBRQ0VD83 1088 aa23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 PGM5Q15124 567 aa23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 IL31RAQ8NI17 732 aa23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 COPS5Q92905 334 aa23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 LBHD1Q9BQE6 289 aaPredicted RBP23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 MROH7Q68CQ1 1323 aa23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 DOCK5Q9H7D0 1870 aa23.74■■□□□ 1.39
CHRNA7-209ENST00000636044 BMP8BP34820 402 aa23.73■■□□□ 1.39
CHRNA7-209ENST00000636044 CCDC62Q6P9F0 684 aa23.73■■□□□ 1.39
CHRNA7-209ENST00000636044 ANKRD33Q7Z3H0 272 aa23.73■■□□□ 1.39
CHRNA7-209ENST00000636044 HEATR3Q7Z4Q2 680 aa23.73■■□□□ 1.39
CHRNA7-209ENST00000636044 SMARCC2Q8TAQ2 1214 aa23.73■■□□□ 1.39
CHRNA7-209ENST00000636044 CUL5Q93034 780 aa23.73■■□□□ 1.39
CHRNA7-209ENST00000636044 FRMPD4Q14CM0 1322 aa23.73■■□□□ 1.39
CHRNA7-209ENST00000636044 A0A1W2PPC1 479 aa23.72■■□□□ 1.39
CHRNA7-209ENST00000636044 DCDC2CA8MYV0 355 aa23.72■■□□□ 1.39
CHRNA7-209ENST00000636044 ARVCFO00192 962 aa23.72■■□□□ 1.39
CHRNA7-209ENST00000636044 CCND2P30279 289 aa23.72■■□□□ 1.39
CHRNA7-209ENST00000636044 METAP2P50579 478 aaKnown RBP eCLIP23.72■■□□□ 1.39
CHRNA7-209ENST00000636044 BRDTQ58F21 947 aaPredicted RBP23.72■■□□□ 1.39
CHRNA7-209ENST00000636044 SH3RF1Q7Z6J0 888 aa23.72■■□□□ 1.39
CHRNA7-209ENST00000636044 GPKOWQ92917 476 aaPredicted RBP eCLIP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms