RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 JAG2Q9Y219 1238 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 AFDNP55196 1824 aaKnown RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 ASNSP08243 561 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 PDHBP11177 359 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 PLCG1P19174 1290 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 CHMP4BP1P59074 171 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 KRT31Q15323 416 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 EDRF1Q3B7T1 1238 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 ZNF569Q5MCW4 686 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 SELENOOQ9BVL4 669 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 MMRN2Q9H8L6 949 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 ATP1A3P13637 1013 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 SYDE2Q5VT97 1194 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 TNFRSF25Q93038 417 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 CNOT6LQ96LI5 555 aaKnown RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 BLZF1Q9H2G9 400 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 MKRN1Q9UHC7 482 aaKnown RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 NWD2Q9ULI1 1742 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 GOLGA8HP0CJ92 632 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 NAALADL2Q58DX5 795 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 ZNF771Q7L3S4 317 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 NLRX1Q86UT6 975 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 JAKMIP2Q96AA8 810 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 NAP1L3Q99457 506 aaPredicted RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 INCENPQ9NQS7 918 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 hCG_1642624A0A1W2PR95 340 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 CETN2P41208 172 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 ZNF827Q17R98 1081 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 USP17L2Q6R6M4 530 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 HDXQ7Z353 690 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 SRGAP1Q7Z6B7 1085 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 LRRC47Q8N1G4 583 aaKnown RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 DDX12PQ92771 950 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 CDHR1Q96JP9 859 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 TEKT3Q9BXF9 490 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 ZBED4O75132 1171 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 RFX1P22670 979 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 CASP14P31944 242 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 SNRPFP62306 86 aaKnown RBP5.05□□□□□ -1.6
SCN1A-210ENST00000635776 XRRA1Q6P2D8 792 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 SYCE1Q8N0S2 351 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 FAM151AQ8WW52 585 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 NACC1Q96RE7 527 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 FRMD4BQ9Y2L6 1034 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 PHLPP1O60346 1717 aa5.05□□□□□ -1.6
SCN1A-210ENST00000635776 FLOT1O75955 427 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 ARMCX5Q6P1M9 558 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 C3orf67Q6ZVT6 689 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 RNF10Q8N5U6 811 aaKnown RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 TTLL6Q8N841 843 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 SYN2Q92777 582 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 NOX5Q96PH1 765 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 DNAI2Q9GZS0 605 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 UBE4BO95155 1302 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 GFPT2O94808 682 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 CUL4BQ13620 913 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 CROCCP2Q86T23 111 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 AGBL3Q8NEM8 1001 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 UBA5Q9GZZ9 404 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 PANK4Q9NVE7 773 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 FEM1BQ9UK73 627 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 ZNF215Q9UL58 517 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 CAPN11Q9UMQ6 739 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 EIF3CLB5ME19 914 aaKnown RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 RBL2Q08999 1139 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 LEKR1Q6ZMV7 388 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 RASGRP2Q7LDG7 609 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 ERGIC2Q96RQ1 377 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 EIF3CQ99613 913 aaKnown RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 TMEM206Q9H813 350 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 GLI3P10071 1580 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 DTNBO60941 627 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 APBA1Q02410 837 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 CCDC24Q8N4L8 307 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 ARMCX3Q9UH62 379 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 TMEM232C9JQI7 657 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 XRCC5P13010 732 aaKnown RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 MAGEA1P43355 309 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 STAT2P52630 851 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 SMTNP53814 917 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 SFMBT2Q5VUG0 894 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 PDXDC2PQ6P474 469 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 FAM107BQ9H098 131 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 NDST4Q9H3R1 872 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 TUFT1Q9NNX1 390 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 LZTFL1Q9NQ48 299 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 ADGRG1Q9Y653 693 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 SAR1BQ9Y6B6 198 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 SSU72P8A0A1W2PR75 194 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 USP17L5A8MUK1 530 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 PPP1R3GB7ZBB8 358 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 AKR1B1P15121 316 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 RHBDL3P58872 404 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 TNNC1P63316 161 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 TBX2Q13207 712 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-210ENST00000635776 KIAA0825Q8IV33 1275 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 CSRNP1Q96S65 589 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 ABHD10Q9NUJ1 306 aa5.04□□□□□ -1.6
SCN1A-210ENST00000635776 TIAM2Q8IVF5 1701 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms