RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 BIRC3Q13489 604 aa9.24□□□□□ -0.93
SMARCA2-246ENST00000635739 CUL1Q13616 776 aa9.24□□□□□ -0.93
SMARCA2-246ENST00000635739 LRCH2Q5VUJ6 765 aa9.24□□□□□ -0.93
SMARCA2-246ENST00000635739 CCDC63Q8NA47 563 aa9.24□□□□□ -0.93
SMARCA2-246ENST00000635739 ZNF622Q969S3 477 aaKnown RBP eCLIP9.24□□□□□ -0.931e-6■■■■□ 25.4
SMARCA2-246ENST00000635739 IFT74Q96LB3 600 aa9.24□□□□□ -0.93
SMARCA2-246ENST00000635739 RNPC3Q96LT9 517 aaKnown RBP9.24□□□□□ -0.93
SMARCA2-246ENST00000635739 LSM14BQ9BX40 385 aaKnown RBP9.24□□□□□ -0.93
SMARCA2-246ENST00000635739 UBA5Q9GZZ9 404 aa9.24□□□□□ -0.93
SMARCA2-246ENST00000635739 PLCB1Q9NQ66 1216 aa9.24□□□□□ -0.93
SMARCA2-246ENST00000635739 A0A087X0B3 334 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 CLSTN1O94985 981 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 RPSAP08865 295 aaKnown RBP9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 CLTAP09496 248 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 PRPHP41219 470 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 SEC24CP53992 1094 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 LACTBP83111 547 aaPredicted RBP9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 ITIH3Q06033 890 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 EZH2Q15910 746 aaKnown RBP9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 NBPF9Q3BBW0 867 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 HIBCHQ6NVY1 386 aaPredicted RBP9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 KDM7AQ6ZMT4 941 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 DAAM2Q86T65 1068 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 NAP1L3Q99457 506 aaPredicted RBP9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 NOVA2Q9UNW9 492 aaKnown RBP9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 FLOT1O75955 427 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 FAM107AO95990 144 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 KRT13P13646 458 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 PLCG1P19174 1290 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 SKOR1P84550 965 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 PTGISQ16647 500 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 NLRP10Q86W26 655 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 PARP9Q8IXQ6 854 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 SEC31BQ9NQW1 1179 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 RBM12Q9NTZ6 932 aaKnown RBP9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 LRRC53A6NM62 1247 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 TECP42680 631 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 CARSP49589 748 aaKnown RBP9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 PPP4R3AQ6IN85 833 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 CCDC65Q8IXS2 484 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 MYOCDQ8IZQ8 938 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 TBC1D5Q92609 795 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 TBC1D31Q96DN5 1066 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 RAB17Q9H0T7 212 aa9.23□□□□□ -0.93
SMARCA2-246ENST00000635739 CETN3O15182 167 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PALMO75781 387 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 RHOBTB3O94955 611 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 MYBL2P10244 700 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 SMTNP53814 917 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 SF3A3Q12874 501 aaKnown RBP eCLIP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 SYCE1Q8N0S2 351 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 P3H4Q92791 437 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 CNOT10Q9H9A5 744 aaKnown RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 SMARCAL1Q9NZC9 954 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 GRID2IPA4D2P6 1211 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PDE2AO00408 941 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 CTNND1O60716 968 aaKnown RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 SHOX2O60902 331 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 GNA14O95837 355 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 SERPING1P05155 500 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 CSF1RP07333 972 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PPP2R5AQ15172 486 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 ZRSR2Q15696 482 aaKnown RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 CNPY4Q8N129 248 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 TCP11Q8WWU5 503 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.22□□□□□ -0.935e-6■■■■□ 19.4
SMARCA2-246ENST00000635739 CAVIN3Q969G5 261 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PBKQ96KB5 322 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 MED15Q96RN5 788 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PLA2G12BQ9BX93 195 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 TAF1DQ9H5J8 278 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PNPLA7Q6ZV29 1317 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 RGPD1P0DJD0 1748 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 A0A1W2PQJ5 194 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 FRMD3A2A2Y4 597 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PGRMC1O00264 195 aaKnown RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 RGS16O15492 202 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 EPB41P11171 864 aaKnown RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 GCKP35557 465 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 SARNPP82979 210 aaKnown RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 TFAP4Q01664 338 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 GFPT1Q06210 699 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PFKFB3Q16875 520 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 ANKRD40Q6AI12 368 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 GIMAP8Q8ND71 665 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PNMA1Q8ND90 353 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 MYCBPAPQ8TBZ2 947 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 SNX29Q8TEQ0 813 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 HDAC7Q8WUI4 952 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 DPH5Q9H2P9 285 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PLAGL2Q9UPG8 496 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 ZNF652Q9Y2D9 606 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 CAPN6Q9Y6Q1 641 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 RNF225M0QZC1 329 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 FECHP22830 423 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 CDK17Q00537 523 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PLCB4Q15147 1175 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 SPTY2D1Q68D10 685 aaPredicted RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 DENND2CQ68D51 928 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 PDXDC2PQ6P474 469 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms