RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 R3HDM1Q15032 1099 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 SURF1Q15526 300 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 NRN1LQ496H8 165 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 AXDND1Q5T1B0 1012 aaPredicted RBP2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 IGFL4Q6B9Z1 124 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ETV3LQ6ZN32 361 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ARHGEF18Q6ZSZ5 1173 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ZNF575Q86XF7 245 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 CPNE8Q86YQ8 564 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 TTLL6Q8N841 843 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 NETO2Q8NC67 525 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ADCY4Q8NFM4 1077 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 DNERQ8NFT8 737 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 NLGN2Q8NFZ4 835 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 DHRS1Q96LJ7 313 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ZSWIM3Q96MP5 696 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 RSRP1Q9BUV0 290 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 SRRTQ9BXP5 876 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 LRRC3Q9BY71 257 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 CSRNP2Q9H175 543 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 IKZF4Q9H2S9 585 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 EHMT1Q9H9B1 1298 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 L2HGDHQ9H9P8 463 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 GP6Q9HCN6 339 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 UBP1Q9NZI7 540 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 VTI1BQ9UEU0 232 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 SF3B6Q9Y3B4 125 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 SUPT16HQ9Y5B9 1047 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 FHOD1Q9Y613 1164 aa2.03□□□□□ -2.08
SMARCB1-209ENST00000635578 ANKRD33BA6NCL7 494 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 EIF4A3P38919 411 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 PMS1P54277 932 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 EPHB4P54760 987 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 NANOS3P60323 173 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 POU4F1Q01851 419 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 APOBRQ0VD83 1088 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 DPY19L1Q2PZI1 675 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 EEF1DP3Q658K8 133 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 ZC3H18Q86VM9 953 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 PPFIBP1Q86W92 1011 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 KBTBD2Q8IY47 623 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 ZNF296Q8WUU4 475 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 CEP89Q96ST8 783 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 YIPF4Q9BSR8 244 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 MTA3Q9BTC8 594 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 TRIM8Q9BZR9 551 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 TMEM168Q9H0V1 697 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 BTG4Q9NY30 223 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 ZNF451Q9Y4E5 1061 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 UNC13AQ9UPW8 1703 aa2.02□□□□□ -2.09
SMARCB1-209ENST00000635578 ROBO2Q9HCK4 1378 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 NPHP3-ACAD11A0A0J9YXS1 232 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 C9orf118A6NHY6 69 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 MEIS3P2A8K0S8 358 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 PATE3B3GLJ2 98 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 TNFRSF10CO14798 259 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 B4GALT4O60513 344 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 ITGA4P13612 1032 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 ZNF28P17035 718 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 CD247P20963 164 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 LMO1P25800 156 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 SEPHS1P49903 392 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 PPP2CBP62714 309 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 PPP2CAP67775 309 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 DGCR2P98153 550 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 HNRNPA0Q13151 305 aaKnown RBP2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 FOXE3Q13461 319 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 LRRFIP1Q32MZ4 808 aaKnown RBP2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 PRR31Q5SQ13 230 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 SLFN13Q68D06 897 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 RCSD1Q6JBY9 416 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 RNF207Q6ZRF8 634 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 TMC4Q7Z404 712 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 DCP2Q8IU60 420 aaKnown RBP2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 Q8TCH9 128 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 MBD6Q96DN6 1003 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 GNRHR2Q96P88 292 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 MCMBPQ9BTE3 642 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 AP5M1Q9H0R1 490 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 PCDH18Q9HCL0 1135 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 MRS2Q9HD23 443 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 MARCH2Q9P0N8 246 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 CROTQ9UKG9 612 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 ZDHHC9Q9Y397 364 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 TNFRSF18Q9Y5U5 241 aa2.01□□□□□ -2.09
SMARCB1-209ENST00000635578 AURKAO14965 403 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 NPHS1O60500 1241 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 SORBS3O60504 671 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 GREM1O60565 184 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 PPFIA2O75334 1257 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 VAMP4O75379 141 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 IL13P35225 146 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 ZNF165P49910 485 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 MLLT6P55198 1093 aaPredicted RBP2□□□□□ -2.09
SMARCB1-209ENST00000635578 ADAM9Q13443 819 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 PRKD1Q15139 912 aaPredicted RBP2□□□□□ -2.09
SMARCB1-209ENST00000635578 ZYXQ15942 572 aaKnown RBP2□□□□□ -2.09
SMARCB1-209ENST00000635578 HS1BP3Q53T59 392 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 ERMP1Q7Z2K6 904 aa2□□□□□ -2.09
SMARCB1-209ENST00000635578 MILR1Q7Z6M3 343 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms