RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 FRMPD2Q68DX3 1309 aaPredicted RBP11.92□□□□□ -0.5
PSPC1-207ENST00000635251 USP17L5A8MUK1 530 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 ZBTB22O15209 634 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 ZNF185O15231 689 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 FGFR1OPO95684 399 aaKnown RBP11.91□□□□□ -0.5
PSPC1-207ENST00000635251 PLCG2P16885 1265 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 RFC4P35249 363 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 VWA3BQ502W6 1294 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 MUM1L1Q5H9M0 696 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 CCDC70Q6NSX1 233 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 C2CD5Q86YS7 1000 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 GOLGA6L1Q8N7Z2 621 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 LARP4BQ92615 738 aaKnown RBP11.91□□□□□ -0.5
PSPC1-207ENST00000635251 IQCDQ96DY2 449 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 MMRN2Q9H8L6 949 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 FAM207AQ9NSI2 230 aaPredicted RBP11.91□□□□□ -0.5
PSPC1-207ENST00000635251 SNED1Q8TER0 1413 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 TACC1O75410 805 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 UFL1O94874 794 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 PLEKP08567 350 aaPredicted RBP11.91□□□□□ -0.5
PSPC1-207ENST00000635251 GRB10Q13322 594 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 ORC2Q13416 577 aaPredicted RBP11.91□□□□□ -0.5
PSPC1-207ENST00000635251 COL24A1Q17RW2 1714 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 COBLL1Q53SF7 1204 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 CENPPQ6IPU0 288 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 UNC13DQ70J99 1090 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 CNBD1Q8NA66 436 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 IFIH1Q9BYX4 1025 aaKnown RBP11.91□□□□□ -0.5
PSPC1-207ENST00000635251 RAB34Q9BZG1 259 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 NDST4Q9H3R1 872 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 MED4Q9NPJ6 270 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 STK17AQ9UEE5 414 aa11.91□□□□□ -0.5
PSPC1-207ENST00000635251 GPR75-ASB3A0A0A6YYF3 556 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 PVALEFA0A1B0GWK0 134 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 TARSL2A2RTX5 802 aaKnown RBP11.9□□□□□ -0.5
PSPC1-207ENST00000635251 MYMKA6NI61 221 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 NKRFO15226 690 aaKnown RBP eCLIP11.9□□□□□ -0.5
PSPC1-207ENST00000635251 ZMYND10O75800 440 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 SMARCA1P28370 1054 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 ACTN2P35609 894 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 ADCY7P51828 1080 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 GPSM2P81274 684 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 CDK17Q00537 523 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 C2orf54Q08AI8 447 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 KRT26Q7Z3Y9 468 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 SMCR8Q8TEV9 937 aaPredicted RBP11.9□□□□□ -0.5
PSPC1-207ENST00000635251 RPGRQ92834 1020 aaKnown RBP11.9□□□□□ -0.5
PSPC1-207ENST00000635251 COA7Q96BR5 231 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 DRC1Q96MC2 740 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 CD209Q9NNX6 404 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 BLOC1S4Q9NUP1 217 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 MYH1P12882 1939 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 ESYT2A0FGR8 921 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 AKR1B10O60218 316 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 MAN2A1Q16706 1144 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 KRT79Q5XKE5 535 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 AMIGO3Q86WK7 504 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 GPIHBP1Q8IV16 184 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 TRIM58Q8NG06 486 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 SNX29Q8TEQ0 813 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 PNMA5Q96PV4 448 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 PURBQ96QR8 312 aaKnown RBP11.9□□□□□ -0.5
PSPC1-207ENST00000635251 TSG101Q99816 390 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 TANGO6Q9C0B7 1094 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 VIPAS39Q9H9C1 493 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 PCDHA13Q9Y5I0 950 aa11.9□□□□□ -0.5
PSPC1-207ENST00000635251 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 POTEMA6NI47 508 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 hCG_1984214I3L0E3 225 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 SLC37A4O43826 429 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 MARCH6O60337 910 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 TDP2O95551 362 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 ERCC3P19447 782 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 EIF4A3P38919 411 aaKnown RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 KIF11P52732 1056 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 RAD51AP2Q09MP3 1159 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 MFSD14BQ5SR56 506 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 RRAGAQ7L523 313 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 SLF2Q8IX21 1173 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 ZNF713Q8N859 430 aaPredicted RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 GDAP1L1Q96MZ0 367 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 ALS2CR12Q96Q35 445 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 MTMR9Q96QG7 549 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 RIOX1Q9H6W3 641 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 ARHGAP20Q9P2F6 1191 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 PLAGL2Q9UPG8 496 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 JRKLQ9Y4A0 524 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 SBF2Q86WG5 1849 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 LRRC53A6NM62 1247 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 PDE2AO00408 941 aaPredicted RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 ZNF263O14978 683 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 EPHB6O15197 1021 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 RNF40O75150 1001 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 MOCS3O95396 460 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 PDHBP11177 359 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 TNNI2P48788 182 aa11.89□□□□□ -0.51
PSPC1-207ENST00000635251 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 EIF6P56537 245 aaKnown RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 IRX5P78411 483 aaPredicted RBP11.89□□□□□ -0.51
PSPC1-207ENST00000635251 PICALMQ13492 652 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms