RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 FDX1P10109 184 aa14.21□□□□□ -0.13
CHD2-218ENST00000629346 STAT2P52630 851 aa14.21□□□□□ -0.13
CHD2-218ENST00000629346 GPM6BQ13491 265 aa14.21□□□□□ -0.13
CHD2-218ENST00000629346 TKFCQ3LXA3 575 aa14.21□□□□□ -0.13
CHD2-218ENST00000629346 GDF6Q6KF10 455 aaPredicted RBP14.21□□□□□ -0.13
CHD2-218ENST00000629346 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.21□□□□□ -0.13
CHD2-218ENST00000629346 TRIM67Q6ZTA4 783 aa14.21□□□□□ -0.13
CHD2-218ENST00000629346 BMP8AQ7Z5Y6 402 aa14.21□□□□□ -0.13
CHD2-218ENST00000629346 MORC4Q8TE76 937 aa14.21□□□□□ -0.13
CHD2-218ENST00000629346 ATOH1Q92858 354 aaPredicted RBP14.21□□□□□ -0.13
CHD2-218ENST00000629346 CEP95Q96GE4 821 aa14.21□□□□□ -0.13
CHD2-218ENST00000629346 POP1Q99575 1024 aaKnown RBP14.21□□□□□ -0.13
CHD2-218ENST00000629346 TECTAO75443 2155 aa14.21□□□□□ -0.13
CHD2-218ENST00000629346 RAD50Q92878 1312 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 KPNA6O60684 536 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 PRDM1O75626 825 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 CXCL10P02778 98 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 LTBRP36941 435 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 SMAD2Q15796 467 aaKnown RBP14.2□□□□□ -0.14
CHD2-218ENST00000629346 RPAINQ86UA6 219 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 CHURC1Q8WUH1 139 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 DHX38Q92620 1227 aaKnown RBP14.2□□□□□ -0.14
CHD2-218ENST00000629346 MKL1Q969V6 931 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 CTAGE1Q96RT6 745 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 NSUN3Q9H649 340 aaKnown RBP14.2□□□□□ -0.14
CHD2-218ENST00000629346 PAG1Q9NWQ8 432 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 MTMR4Q9NYA4 1195 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 ARPP21Q9UBL0 812 aaPredicted RBP14.2□□□□□ -0.14
CHD2-218ENST00000629346 SCN10AQ9Y5Y9 1956 aa14.2□□□□□ -0.14
CHD2-218ENST00000629346 GREB1LQ9C091 1923 aaPredicted RBP14.19□□□□□ -0.14
CHD2-218ENST00000629346 ZBED9Q6R2W3 1325 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 IGKV6D-41A0A0C4DH26 115 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 A6NJR5 290 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 H3BNC9 293 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 STXBP3O00186 592 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 EFCAB14O75071 495 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 TTLL1O95922 423 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 CKBP12277 381 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 ALDH5A1P51649 535 aaPredicted RBP14.19□□□□□ -0.14
CHD2-218ENST00000629346 DLX2Q07687 328 aaPredicted RBP14.19□□□□□ -0.14
CHD2-218ENST00000629346 BAATQ14032 418 aaPredicted RBP14.19□□□□□ -0.14
CHD2-218ENST00000629346 PPP2R5BQ15173 497 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 FAM160B2Q86V87 743 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 ERC1Q8IUD2 1116 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 RPAP2Q8IXW5 612 aaPredicted RBP14.19□□□□□ -0.14
CHD2-218ENST00000629346 MYOCDQ8IZQ8 938 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 ZNF444Q8N0Y2 327 aaPredicted RBP14.19□□□□□ -0.14
CHD2-218ENST00000629346 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 STAG1Q8WVM7 1258 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.19□□□□□ -0.14
CHD2-218ENST00000629346 ADD3Q9UEY8 706 aaKnown RBP14.19□□□□□ -0.14
CHD2-218ENST00000629346 CCPG1Q9ULG6 757 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 MYH4Q9Y623 1939 aa14.19□□□□□ -0.14
CHD2-218ENST00000629346 RBM47A0AV96 593 aaKnown RBP14.18□□□□□ -0.14
CHD2-218ENST00000629346 MBTPS2O43462 519 aa14.18□□□□□ -0.14
CHD2-218ENST00000629346 COL19A1Q14993 1142 aa14.18□□□□□ -0.14
CHD2-218ENST00000629346 PKN1Q16512 942 aa14.18□□□□□ -0.14
CHD2-218ENST00000629346 KCTD1Q719H9 257 aa14.18□□□□□ -0.14
CHD2-218ENST00000629346 FBXL6Q8N531 539 aa14.18□□□□□ -0.14
CHD2-218ENST00000629346 PUS7LQ9H0K6 701 aaKnown RBP14.18□□□□□ -0.14
CHD2-218ENST00000629346 BOLA2Q9H3K6 86 aa14.18□□□□□ -0.14
CHD2-218ENST00000629346 PTPDC1A2A3K4 754 aa14.17□□□□□ -0.14
CHD2-218ENST00000629346 CSPG5O95196 566 aa14.17□□□□□ -0.14
CHD2-218ENST00000629346 PARNO95453 639 aaKnown RBP14.17□□□□□ -0.14
CHD2-218ENST00000629346 AMHP03971 560 aa14.17□□□□□ -0.14
CHD2-218ENST00000629346 MCCP23508 829 aa14.17□□□□□ -0.14
CHD2-218ENST00000629346 SLC1A4P43007 532 aa14.17□□□□□ -0.14
CHD2-218ENST00000629346 VCPP55072 806 aaKnown RBP14.17□□□□□ -0.14
CHD2-218ENST00000629346 PDE4BQ07343 736 aa14.17□□□□□ -0.14
CHD2-218ENST00000629346 PDE4DQ08499 809 aa14.17□□□□□ -0.14
CHD2-218ENST00000629346 TMEM192Q8IY95 271 aa14.17□□□□□ -0.14
CHD2-218ENST00000629346 SAMD11Q96NU1 681 aa14.17□□□□□ -0.14
CHD2-218ENST00000629346 IGFLR1Q9H665 355 aa14.17□□□□□ -0.14
CHD2-218ENST00000629346 H0Y858 1186 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 NKRFO15226 690 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHD2-218ENST00000629346 UPP2O95045 317 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 IFIT2P09913 472 aaKnown RBP14.16□□□□□ -0.14
CHD2-218ENST00000629346 TXNP10599 105 aaKnown RBP14.16□□□□□ -0.14
CHD2-218ENST00000629346 CALML3P27482 149 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 HTRA4P83105 476 aaPredicted RBP14.16□□□□□ -0.14
CHD2-218ENST00000629346 MBTPS1Q14703 1052 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 SBK1Q52WX2 424 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 ZNF618Q5T7W0 954 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 RHPN1Q8TCX5 695 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 SP7Q8TDD2 431 aaPredicted RBP14.16□□□□□ -0.14
CHD2-218ENST00000629346 SCFD2Q8WU76 684 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 YME1L1Q96TA2 773 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 TLR9Q9NR96 1032 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 PRR12Q9ULL5 1215 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 MTMR7Q9Y216 660 aa14.16□□□□□ -0.14
CHD2-218ENST00000629346 LCTP09848 1927 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 PTPRZ1P23471 2315 aaPredicted RBP14.15□□□□□ -0.14
CHD2-218ENST00000629346 NFIBO00712 420 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 NCK2O43639 380 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 LGR5O75473 907 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 GTF2F1P35269 517 aaKnown RBP eCLIP14.15□□□□□ -0.14
CHD2-218ENST00000629346 ZXDAP98168 799 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
CHD2-218ENST00000629346 UBE3CQ15386 1083 aa14.15□□□□□ -0.14
CHD2-218ENST00000629346 CTC1Q2NKJ3 1217 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms