RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 USP33Q8TEY7 942 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 DIO2Q92813 273 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 OSBP2Q969R2 916 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 NBPF4Q96M43 638 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 DEPDC7Q96QD5 511 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 AARSD1Q9BTE6 412 aaKnown RBP3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 HIRIP3Q9BW71 556 aaPredicted RBP3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 DBR1Q9UK59 544 aaKnown RBP3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 F8W031 263 aaPredicted RBP3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 HRKO00198 91 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 ADCY3O60266 1144 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 MSCO60682 206 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 CPP00450 1065 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 NTRK1P04629 796 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 YBX3P16989 372 aaKnown RBP eCLIP3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 PI3P19957 117 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 LTBRP36941 435 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 BCL6P41182 706 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 MC3RP41968 323 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 MAPKAPK2P49137 400 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 RPL11P62913 178 aaKnown RBP3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 PRR5P85299 388 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 NR1I3Q14994 352 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 ACBD5Q5T8D3 534 aaPredicted RBP3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 FOXB2Q5VYV0 432 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 E4F1Q66K89 784 aaPredicted RBP3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 OLFML2BQ68BL8 750 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 USP53Q70EK8 1073 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 IGDCC3Q8IVU1 814 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 BHLHE22Q8NFJ8 381 aaPredicted RBP3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 PLEKHO2Q8TD55 490 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 KCTD13Q8WZ19 329 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 ARMC5Q96C12 935 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 SGSM3Q96HU1 749 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 SIRPGQ9P1W8 387 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 PPARGC1AQ9UBK2 798 aaKnown RBP3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 SMG5Q9UPR3 1016 aaKnown RBP3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 PCDHA2Q9Y5H9 948 aa3.77□□□□□ -1.81
SCARNA4-201ENST00000629045 TRAV20A0A0B4J274 112 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 IQCA1LA6NCM1 817 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 DBX1A6NMT0 343 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 C22orf46C9J442 243 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 ABLIM1O14639 778 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 FGFR1P11362 822 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 PABPC1P11940 636 aaKnown RBP3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 FBLN1P23142 703 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 LIMS1P48059 325 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 RBL2Q08999 1139 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 TMEM62Q0P6H9 643 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 MAP4K2Q12851 820 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 BMS1Q14692 1282 aaKnown RBP3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 CBX2Q14781 532 aaPredicted RBP3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 NTRK3Q16288 839 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 KCNA10Q16322 511 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 KCNT2Q6UVM3 1135 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 NSMFQ6X4W1 530 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 LDHDQ86WU2 507 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 ANKLE2Q86XL3 938 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 KRTAP1-3Q8IUG1 177 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 LRRC56Q8IYG6 542 aaPredicted RBP3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 LRRC47Q8N1G4 583 aaKnown RBP3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 NETO2Q8NC67 525 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 PANK1Q8TE04 598 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 MZB1Q8WU39 189 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 CHAMP1Q96JM3 812 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 CCDC140Q96MF4 163 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 SRPK1Q96SB4 655 aaKnown RBP3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 PHF20Q9BVI0 1012 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 SPATA9Q9BWV2 254 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 CCDC113Q9H0I3 377 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 PCDHA5Q9Y5H7 936 aa3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 TIMM13Q9Y5L4 95 aaPredicted RBP3.76□□□□□ -1.81
SCARNA4-201ENST00000629045 KDM2BQ8NHM5 1336 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 IRS4O14654 1257 aaPredicted RBP3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 N4BP3O15049 544 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 MYO1BO43795 1136 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 NUAK1O60285 661 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 FAM153BP0C7A2 387 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 CFPP27918 469 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 PMLP29590 882 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 IFRD2Q12894 506 aaPredicted RBP3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 TESK1Q15569 626 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 FAM209AQ5JX71 171 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 CEP68Q76N32 757 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 C1QL4Q86Z23 238 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 ALG3Q92685 438 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 TMEM169Q96HH4 297 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 IRF2BPLQ9H1B7 796 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 CNOT6Q9ULM6 557 aaKnown RBP3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 IRAK3Q9Y616 596 aa3.75□□□□□ -1.81
SCARNA4-201ENST00000629045 SGSM2O43147 1006 aa3.74□□□□□ -1.81
SCARNA4-201ENST00000629045 BUB1BO60566 1050 aaPredicted RBP3.74□□□□□ -1.81
SCARNA4-201ENST00000629045 ASGR2P07307 311 aa3.74□□□□□ -1.81
SCARNA4-201ENST00000629045 IGFBP6P24592 240 aaPredicted RBP3.74□□□□□ -1.81
SCARNA4-201ENST00000629045 IQCEQ6IPM2 695 aa3.74□□□□□ -1.81
SCARNA4-201ENST00000629045 LCNL1Q6ZST4 164 aa3.74□□□□□ -1.81
SCARNA4-201ENST00000629045 ASXL2Q76L83 1435 aa3.74□□□□□ -1.81
SCARNA4-201ENST00000629045 DCP2Q8IU60 420 aaKnown RBP3.74□□□□□ -1.81
SCARNA4-201ENST00000629045 TMEFF1Q8IYR6 380 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms