RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 CCDC85BQ15834 202 aaPredicted RBP8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 LRRFIP1Q32MZ4 808 aaKnown RBP8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 TMEM31Q5JXX7 168 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 PPP4R3BQ5MIZ7 849 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 TMEM63BQ5T3F8 832 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ZSCAN25Q6NSZ9 544 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 FAM160B2Q86V87 743 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 HERC6Q8IVU3 1022 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ITPRIPQ8IWB1 547 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 FTSJ3Q8IY81 847 aaKnown RBP8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 KBTBD3Q8NAB2 608 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 STAG1Q8WVM7 1258 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 HLA-CQ95604 372 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 OSBP2Q969R2 916 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 DDRGK1Q96HY6 314 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 DNAJC2Q99543 621 aaKnown RBP8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 KCNH6Q9H252 994 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 CD320Q9NPF0 282 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 HCN4Q9Y3Q4 1203 aa8.06□□□□□ -1.12
SOX9-AS1-218ENST00000628742 SCN5AQ14524 2016 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 PRR33A8MZF0 331 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 IFIT2P09913 472 aaKnown RBP8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 IQCF3P0C7M6 154 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 GNAT2P19087 354 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 STAT2P52630 851 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 CCL23P55773 120 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 CPXCR1Q8N123 301 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 CHURC1Q8WUH1 139 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 PPM1EQ8WY54 764 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 APPBP2Q92624 585 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 KIFC2Q96AC6 838 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 RANBP17Q9H2T7 1088 aaKnown RBP8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ZNF287Q9HBT7 754 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 PDGFCQ9NRA1 345 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 TSHZ2Q9NRE2 1034 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 RNF146Q9NTX7 359 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 TRMT13Q9NUP7 481 aaKnown RBP8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 POLR3EQ9NVU0 708 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 CLIP2Q9UDT6 1046 aa8.05□□□□□ -1.12
SOX9-AS1-218ENST00000628742 CACNA1AO00555 2505 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 DMDP11532 3685 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 DPYSL4O14531 572 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 NKRFO15226 690 aaKnown RBP eCLIP8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 DYNC1LI2O43237 492 aaPredicted RBP8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 KPNA6O60684 536 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 HMMRO75330 724 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 PARNO95453 639 aaKnown RBP8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ICAM1P05362 532 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ZFYP08048 801 aaPredicted RBP8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 HOXD8P13378 290 aaPredicted RBP8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 PTGS1P23219 599 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 CPT1AP50416 773 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ERVK-21P61565 698 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 LSM11P83369 360 aaKnown RBP eCLIP8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 GRB10Q13322 594 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 LEXMQ3ZCV2 418 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 SLFN13Q68D06 897 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 RCSD1Q6JBY9 416 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 CCDC62Q6P9F0 684 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 TRAF7Q6Q0C0 670 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 FAM178BQ8IXR5 827 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ZNF454Q8N9F8 522 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 IL27Q8NEV9 243 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 SCLYQ96I15 445 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 TRERF1Q96PN7 1200 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 AP5M1Q9H0R1 490 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 BOLA2Q9H3K6 86 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 IL17RBQ9NRM6 502 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ANAPC4Q9UJX5 808 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 SPTBN4Q9H254 2564 aa8.04□□□□□ -1.12
SOX9-AS1-218ENST00000628742 GPAA1O43292 621 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ACTN1P12814 892 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 HOXC8P31273 242 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ALDH5A1P51649 535 aaPredicted RBP8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 PSMC6P62333 389 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 MUM1L1Q5H9M0 696 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 KRT40Q6A162 431 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 FBXO16Q8IX29 292 aaPredicted RBP8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 RGS22Q8NE09 1264 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 CAGE1Q8TC20 777 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 NEK9Q8TD19 979 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 AFAP1L1Q8TED9 768 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 CLEC4DQ8WXI8 215 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 VTI1AQ96AJ9 217 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 MTG1Q9BT17 334 aaPredicted RBP8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 MKNK2Q9HBH9 465 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ADD3Q9UEY8 706 aaKnown RBP8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 PRR12Q9ULL5 1215 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 COG6Q9Y2V7 657 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 SIP14410 1827 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 WDR19Q8NEZ3 1342 aa8.03□□□□□ -1.12
SOX9-AS1-218ENST00000628742 ZDBF2Q9HCK1 2354 aa8.02□□□□□ -1.13
SOX9-AS1-218ENST00000628742 PATL2C9JE40 543 aaKnown RBP8.02□□□□□ -1.13
SOX9-AS1-218ENST00000628742 TMEM232C9JQI7 657 aa8.02□□□□□ -1.13
SOX9-AS1-218ENST00000628742 RFXAPO00287 272 aa8.02□□□□□ -1.13
SOX9-AS1-218ENST00000628742 RNF113AO15541 343 aaKnown RBP8.02□□□□□ -1.13
SOX9-AS1-218ENST00000628742 GJB5O95377 273 aa8.02□□□□□ -1.13
SOX9-AS1-218ENST00000628742 SNHG28P0DPA3 235 aa8.02□□□□□ -1.13
SOX9-AS1-218ENST00000628742 CYP2C9P11712 490 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms